RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TMEM243Q9BU79 118 aa4.65□□□□□ -1.67
PTPRO-208ENST00000542557 WNK1Q9H4A3 2382 aa4.65□□□□□ -1.67
PTPRO-208ENST00000542557 TRGV2A0A075B6R0 118 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 PPDPFLQ8WWR9 84 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 PPDPFQ9H3Y8 114 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 UBE2L6O14933 153 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE7O76087 117 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 PRSS2P07478 247 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE12FP0CL80 117 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE12GP0CL81 117 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE12IP0CL82 117 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 INSL3P51460 131 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 CIRBPQ14011 172 aaKnown RBP4.64□□□□□ -1.67
PTPRO-208ENST00000542557 ATXN8Q156A1 80 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 Q1RN00 199 aa4.64□□□□□ -1.67
PTPRO-208ENST00000542557 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
PTPRO-208ENST00000542557 F5H768 121 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 COPS9Q8WXC6 57 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 SIGMAR1Q99720 223 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 UNC79Q9P2D8 2635 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 TRIAP1O43715 76 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 SLC25A20O43772 301 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 GYPEP15421 78 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 LINC00612Q8N6U2 182 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 LINC00482Q8N8I6 264 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 Q9H8V8 135 aa4.63□□□□□ -1.67
PTPRO-208ENST00000542557 TRAV13-1A0A0B4J241 112 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 H7C2G1 150 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 KIR2DL5BQ8NHK3 375 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 ZNF625Q96I27 306 aaPredicted RBP4.62□□□□□ -1.67
PTPRO-208ENST00000542557 ICOSQ9Y6W8 199 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 V9GYY9 64 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 C9JAW5 83 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 FHL2Q14192 279 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 ANKRD29Q8N6D5 301 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 CARD19Q96LW7 228 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 ITPR2Q14571 2701 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 COX6CP09669 75 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 KRTAP10-3P60369 221 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 LINC00308Q8TCZ7 52 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 ACANP16112 2415 aa4.62□□□□□ -1.67
PTPRO-208ENST00000542557 MTORP42345 2549 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 TRBV6-8A0A0A6YYG3 113 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 LOC100131303A0A0U1RQF7 123 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 LINC00528Q8N1L1 170 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 NIPBLQ6KC79 2804 aaeCLIP4.61□□□□□ -1.67
PTPRO-208ENST00000542557 JMJD1CQ15652 2540 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 TRBV10-2A0A0K0K1G8 114 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 LINC00336Q6ZUF6 198 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
PTPRO-208ENST00000542557 SMIM9A6NGZ8 99 aa4.6□□□□□ -1.67
PTPRO-208ENST00000542557 RPL13AP40429 203 aaKnown RBP4.6□□□□□ -1.67
PTPRO-208ENST00000542557 NPC2P61916 151 aa4.6□□□□□ -1.67
PTPRO-208ENST00000542557 MDFIQ99750 246 aa4.6□□□□□ -1.67
PTPRO-208ENST00000542557 HELZ2Q9BYK8 2649 aaKnown RBP4.6□□□□□ -1.67
PTPRO-208ENST00000542557 SETD2Q9BYW2 2564 aaPredicted RBP4.6□□□□□ -1.67
PTPRO-208ENST00000542557 DAND5Q8N907 189 aa4.6□□□□□ -1.67
PTPRO-208ENST00000542557 H3BT86 120 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 LST1O00453 97 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 CRLF1O75462 422 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 SMR3AQ99954 134 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 LY6G6DO95868 133 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 GAGE6Q13070 117 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 MEIG1Q5JSS6 88 aa4.59□□□□□ -1.67
PTPRO-208ENST00000542557 NOTCH3Q9UM47 2321 aa4.59□□□□□ -1.68
PTPRO-208ENST00000542557 HIVEP2P31629 2446 aa4.59□□□□□ -1.68
PTPRO-208ENST00000542557 TMEM262E9PQX1 116 aa4.59□□□□□ -1.68
PTPRO-208ENST00000542557 C9orf66Q5T8R8 295 aa4.59□□□□□ -1.68
PTPRO-208ENST00000542557 SOSTDC1Q6X4U4 206 aa4.59□□□□□ -1.68
PTPRO-208ENST00000542557 IGLV4-60A0A075B6I1 120 aa4.58□□□□□ -1.68
PTPRO-208ENST00000542557 IGHV3OR16-9A0A0B4J2B5 98 aa4.58□□□□□ -1.68
PTPRO-208ENST00000542557 COX7B2Q8TF08 81 aa4.58□□□□□ -1.68
PTPRO-208ENST00000542557 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
PTPRO-208ENST00000542557 FAM222AQ5U5X8 452 aa4.58□□□□□ -1.68
PTPRO-208ENST00000542557 A0A087WZ39 114 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 LYRM9A8MSI8 78 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 DEFB130BP0DP73 79 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 DEFB130AP0DP74 79 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 NTN5Q8WTR8 489 aaPredicted RBP4.57□□□□□ -1.68
PTPRO-208ENST00000542557 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 C2orf82Q6UX34 121 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 PRO0255Q9UI72 69 aa4.57□□□□□ -1.68
PTPRO-208ENST00000542557 FASNP49327 2511 aaKnown RBP4.57□□□□□ -1.68
PTPRO-208ENST00000542557 COX7A2LO14548 114 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 CLEC2BQ92478 149 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 UBE2WQ96B02 151 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 LINC00959A0A1B0GUT2 108 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 LINC01561Q8N1V8 128 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 IBA57-AS1B1ANH7 110 aa4.56□□□□□ -1.68
PTPRO-208ENST00000542557 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 APOC4P55056 127 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 XGP55808 180 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 TRACP01848 142 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 DEFB121Q5J5C9 76 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 MIR7-3HGQ8N6C7 128 aa4.55□□□□□ -1.68
PTPRO-208ENST00000542557 IGKV3OR2-268A0A0C4DH90 116 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms