RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 REG3AQ06141 175 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 PLEKHB2Q96CS7 222 aa12.04□□□□□ -0.48
RAB6A-208ENST00000541795 IGHV1-58A0A0C4DH39 117 aa12.03□□□□□ -0.48
RAB6A-208ENST00000541795 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
RAB6A-208ENST00000541795 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
RAB6A-208ENST00000541795 ZNF815PA8K554 130 aa12.02□□□□□ -0.48
RAB6A-208ENST00000541795 KLK12Q9UKR0 248 aa12.02□□□□□ -0.48
RAB6A-208ENST00000541795 SIVA1O15304 175 aa12.02□□□□□ -0.49
RAB6A-208ENST00000541795 CCL25O15444 150 aa12.02□□□□□ -0.49
RAB6A-208ENST00000541795 IGHV3OR16-9A0A0B4J2B5 98 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 SMIM1B2RUZ4 78 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 XCL1P47992 114 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 CCL18P55774 89 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 PRR34Q9NV39 138 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
RAB6A-208ENST00000541795 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
RAB6A-208ENST00000541795 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
RAB6A-208ENST00000541795 HIGD1BQ9P298 99 aa11.98□□□□□ -0.49
RAB6A-208ENST00000541795 IGLV10-54A0A075B6I4 117 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 CRPP02741 224 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
RAB6A-208ENST00000541795 A0A087WZ39 114 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 C5orf38Q86SI9 138 aa11.97□□□□□ -0.49
RAB6A-208ENST00000541795 DNAH10OSP0CZ25 163 aa11.96□□□□□ -0.49
RAB6A-208ENST00000541795 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
RAB6A-208ENST00000541795 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
RAB6A-208ENST00000541795 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
RAB6A-208ENST00000541795 M0R143 59 aa11.95□□□□□ -0.5
RAB6A-208ENST00000541795 SNHG12Q9BXW3 62 aa11.95□□□□□ -0.5
RAB6A-208ENST00000541795 APLNQ9ULZ1 77 aa11.95□□□□□ -0.5
RAB6A-208ENST00000541795 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
RAB6A-208ENST00000541795 ZFAND6Q6FIF0 208 aa11.95□□□□□ -0.5
RAB6A-208ENST00000541795 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
RAB6A-208ENST00000541795 EREGO14944 169 aa11.94□□□□□ -0.5
RAB6A-208ENST00000541795 HINT1P49773 126 aaPredicted RBP11.94□□□□□ -0.5
RAB6A-208ENST00000541795 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
RAB6A-208ENST00000541795 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
RAB6A-208ENST00000541795 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
RAB6A-208ENST00000541795 BATFQ16520 125 aa11.93□□□□□ -0.5
RAB6A-208ENST00000541795 TRAV8-4A0A0B4J246 113 aa11.93□□□□□ -0.5
RAB6A-208ENST00000541795 HSD52Q0P140 79 aa11.93□□□□□ -0.5
RAB6A-208ENST00000541795 MIAQ16674 131 aa11.93□□□□□ -0.5
RAB6A-208ENST00000541795 COX7A2LO14548 114 aa11.92□□□□□ -0.5
RAB6A-208ENST00000541795 FOXI1Q12951 378 aa11.92□□□□□ -0.5
RAB6A-208ENST00000541795 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
RAB6A-208ENST00000541795 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
RAB6A-208ENST00000541795 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
RAB6A-208ENST00000541795 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
RAB6A-208ENST00000541795 FBN3Q75N90 2809 aa11.91□□□□□ -0.5
RAB6A-208ENST00000541795 NDUFA1O15239 70 aa11.9□□□□□ -0.5
RAB6A-208ENST00000541795 COX7B2Q8TF08 81 aa11.9□□□□□ -0.5
RAB6A-208ENST00000541795 TOMM7Q9P0U1 55 aa11.9□□□□□ -0.5
RAB6A-208ENST00000541795 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
RAB6A-208ENST00000541795 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
RAB6A-208ENST00000541795 MALP21145 153 aa11.89□□□□□ -0.51
RAB6A-208ENST00000541795 Q9H8V8 135 aa11.89□□□□□ -0.51
RAB6A-208ENST00000541795 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
RAB6A-208ENST00000541795 HIST1H4GQ99525 98 aa11.88□□□□□ -0.51
RAB6A-208ENST00000541795 TAL2Q16559 108 aa11.88□□□□□ -0.51
RAB6A-208ENST00000541795 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
RAB6A-208ENST00000541795 GCSHP23434 173 aa11.86□□□□□ -0.51
RAB6A-208ENST00000541795 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB6A-208ENST00000541795 ORAOV1Q8WV07 137 aa11.86□□□□□ -0.51
RAB6A-208ENST00000541795 C1orf43Q9BWL3 253 aa11.86□□□□□ -0.51
RAB6A-208ENST00000541795 SPANXB1Q9NS25 103 aaPredicted RBP11.86□□□□□ -0.51
RAB6A-208ENST00000541795 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 PRSS2P07478 247 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 Q8IZM0 81 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 CEND1Q8N111 149 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 LYSTQ99698 3801 aa11.85□□□□□ -0.51
RAB6A-208ENST00000541795 HERV-K104P63124 156 aa11.84□□□□□ -0.51
RAB6A-208ENST00000541795 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
RAB6A-208ENST00000541795 KRTAP26-1Q6PEX3 210 aa11.84□□□□□ -0.51
RAB6A-208ENST00000541795 Q9HAA7 133 aa11.84□□□□□ -0.51
RAB6A-208ENST00000541795 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.51
RAB6A-208ENST00000541795 APOMO95445 188 aa11.83□□□□□ -0.51
RAB6A-208ENST00000541795 C6orf226Q5I0X4 101 aa11.83□□□□□ -0.51
RAB6A-208ENST00000541795 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
RAB6A-208ENST00000541795 LITAFQ99732 161 aa11.83□□□□□ -0.52
RAB6A-208ENST00000541795 TM2D2Q9BX73 214 aa11.82□□□□□ -0.52
RAB6A-208ENST00000541795 PLECQ15149 4684 aaKnown RBP11.82□□□□□ -0.52
RAB6A-208ENST00000541795 TIMM17BO60830 172 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 FXYD2P54710 66 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 K7EP13 123 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 CFAP161Q6P656 301 aa11.81□□□□□ -0.52
RAB6A-208ENST00000541795 A0A1B0GV90 55 aa11.8□□□□□ -0.52
RAB6A-208ENST00000541795 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
RAB6A-208ENST00000541795 CIRBPQ14011 172 aaKnown RBP11.8□□□□□ -0.52
RAB6A-208ENST00000541795 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
RAB6A-208ENST00000541795 MEIG1Q5JSS6 88 aa11.8□□□□□ -0.52
RAB6A-208ENST00000541795 MUC7Q8TAX7 377 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms