RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 HMCN2Q8NDA2 5059 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 NIPBLQ6KC79 2804 aaeCLIP0.33□□□□□ -2.36
CUL3-214ENST00000541548 ARHGEF10O15013 1369 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 PRKDCP78527 4128 aaKnown RBP0.33□□□□□ -2.36
CUL3-214ENST00000541548 LAMA5O15230 3695 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 SPTBN1Q01082 2364 aaKnown RBP0.33□□□□□ -2.36
CUL3-214ENST00000541548 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 RNF213Q63HN8 5207 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 AKAP9Q99996 3911 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 NSD3Q9BZ95 1437 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 URB1O60287 2271 aaKnown RBP0.33□□□□□ -2.36
CUL3-214ENST00000541548 TEX49A0A1B0GTD5 131 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 FAM236AA0A1B0GUQ0 79 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 FAM236BA0A1B0GV22 79 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 LOC730098B7Z3J9 87 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 PYYP10082 97 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 ASIPP42127 132 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 ELOF1P60002 83 aaKnown RBP0.33□□□□□ -2.36
CUL3-214ENST00000541548 CYP2G1PQ6ZSU1 146 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 LRRC37AA6NMS7 1700 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 NALCNQ8IZF0 1738 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 XRN1Q8IZH2 1706 aaKnown RBP0.33□□□□□ -2.36
CUL3-214ENST00000541548 TOGARAM1Q9Y4F4 1720 aa0.33□□□□□ -2.36
CUL3-214ENST00000541548 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
CUL3-214ENST00000541548 MGAQ8IWI9 3026 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 TACC2O95359 2948 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 DCHS2Q6V1P9 2916 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 PIK3C2BO00750 1634 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 F2Z2F3 143 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 ATP11AUNQ6ZP68 121 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 BET1LQ9NYM9 111 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 FYCO1Q9BQS8 1478 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 PRXQ9BXM0 1461 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 ZNF831Q5JPB2 1677 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 ACACAQ13085 2346 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 ABCC6O95255 1503 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 FAT3Q8TDW7 4589 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 VPS13CQ709C8 3753 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 IQGAP2Q13576 1575 aa0.32□□□□□ -2.36
CUL3-214ENST00000541548 BTAF1O14981 1849 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 ARFGEF1Q9Y6D6 1849 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 EIF2AK4Q9P2K8 1649 aaKnown RBP0.31□□□□□ -2.36
CUL3-214ENST00000541548 AKAP11Q9UKA4 1901 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 C4AP0C0L4 1744 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 QSER1Q2KHR3 1735 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 DDX60LQ5H9U9 1706 aaKnown RBP0.31□□□□□ -2.36
CUL3-214ENST00000541548 MYO5CQ9NQX4 1742 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 LCE6AA0A183 80 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 M0R2Z0 102 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 YPEL1O60688 119 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 IGLC6P0CF74 106 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 NPC2P61916 151 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 MORN2Q502X0 79 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 MIC13Q5XKP0 118 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 MMGT1Q8N4V1 131 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 TSTD1Q8NFU3 115 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 LTN1O94822 1766 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 CFAP74Q9C0B2 1584 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 MAP2P11137 1827 aaKnown RBP0.31□□□□□ -2.36
CUL3-214ENST00000541548 CDK5RAP2Q96SN8 1893 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 PLXNA1Q9UIW2 1896 aa0.31□□□□□ -2.36
CUL3-214ENST00000541548 SYNE1Q8NF91 8797 aaKnown RBP0.31□□□□□ -2.36
CUL3-214ENST00000541548 C5P01031 1676 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 NAIPQ13075 1403 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 DSTQ03001 7570 aaKnown RBP0.3□□□□□ -2.36
CUL3-214ENST00000541548 K7ERU9 68 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 M0R2P5 195 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 LINC00694P0DN24 101 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 OR2T2Q6IF00 324 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 PPP1R1CQ8WVI7 109 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 NDUFA12Q9UI09 145 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 CDC42BPGQ6DT37 1551 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 CENPEQ02224 2701 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 TANC1Q9C0D5 1861 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 SACSQ9NZJ4 4579 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 DYNC2H1Q8NCM8 4307 aaKnown RBP0.3□□□□□ -2.36
CUL3-214ENST00000541548 ANKRD36BQ8N2N9 1353 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 PRDM2Q13029 1718 aa0.3□□□□□ -2.36
CUL3-214ENST00000541548 KDM3BQ7LBC6 1761 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 CCDC141Q6ZP82 1450 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 COL7A1Q02388 2944 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 MYH13Q9UKX3 1938 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 AKAP6Q13023 2319 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 TRBV20-1A0A075B6N2 111 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 TRAV12-2A0A075B6T6 113 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 A0A096LNT2 108 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 TRAV2A0A0B4J234 112 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 TRAV12-3A0A0B4J271 114 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 J3QR89 54 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 LINC01545Q5VT33 79 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 CTAGE3PQ8IX95 158 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 C4orf33Q8N1A6 199 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 C20orf197Q8N268 126 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 MAFIPQ8WZ33 124 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 ERG28Q9UKR5 140 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 FAM208AQ9UK61 1670 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms