RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 A0A096LNJ9 63 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 IGIPA6NJ69 53 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 C16orf90A8MZG2 172 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 C1orf196B1AJZ1 125 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 TRGC2P03986 189 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 NPSP0C0P6 89 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 XCL1P47992 114 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 FOXI1Q12951 378 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 SS18Q15532 418 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 LINC00173Q6ZV60 143 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 FA2HQ7L5A8 372 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 C15orf56Q8N910 161 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 TMEM141Q96I45 108 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 TIMM17AQ99595 171 aa4.57□□□□□ -1.68
LPCAT3-209ENST00000540060 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 TRAV13-1A0A0B4J241 112 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 ATP6V1G1O75348 118 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 PRSS1P07477 247 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 LINC00614P0C842 121 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 G0S2P27469 103 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 C14orf177Q52M58 125 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 TEX43Q6ZNM6 134 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 AMELXQ99217 191 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 RYR1P21817 5038 aa4.56□□□□□ -1.68
LPCAT3-209ENST00000540060 LINC01549A6NIU2 74 aa4.55□□□□□ -1.68
LPCAT3-209ENST00000540060 Q6ZN92 141 aa4.55□□□□□ -1.68
LPCAT3-209ENST00000540060 ERASQ7Z444 233 aa4.55□□□□□ -1.68
LPCAT3-209ENST00000540060 HERC2O95714 4834 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 GVQW2A0A096LPI5 108 aaPredicted RBP4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 IGHV3OR16-9A0A0B4J2B5 98 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 hDV102S1A0JD36 115 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 HBDP02042 147 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 S100A1P23297 94 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 GCSHP23434 173 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 UBE2D1P51668 147 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 RAB5BP61020 215 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 PMCHL1Q16048 86 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 PAPPA-AS1Q5QFB9 102 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 ZC2HC1BQ5TFG8 222 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 CHCHD1Q96BP2 118 aaKnown RBP4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 SCGB3A1Q96QR1 104 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 C2orf88Q9BSF0 95 aa4.54□□□□□ -1.68
LPCAT3-209ENST00000540060 HSPG2P98160 4391 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 COX7A2LO14548 114 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 LINC00310P59036 64 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 CNBPP62633 177 aaKnown RBP4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 ODF1Q14990 250 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 PDZD11Q5EBL8 140 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 LINC00242Q5T6M2 205 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 CFAP161Q6P656 301 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 VCX2Q9H322 139 aa4.53□□□□□ -1.68
LPCAT3-209ENST00000540060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 SLPIP03973 132 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 MALP21145 153 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 COX6A2Q02221 97 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 BAGE3Q86Y29 109 aa4.52□□□□□ -1.69
LPCAT3-209ENST00000540060 A0A087WZ39 114 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BKO60814 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HSBP1O75506 76 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 SERF1AO75920 110 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BJP06899 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BOP23527 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BBP33778 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BDP58876 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BCP62807 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 PMVKQ15126 192 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST2H2BEQ16778 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 Q6ZSA8 131 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 C9orf163Q8N9P6 203 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BHQ93079 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 LINC00526Q96FQ7 95 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BNQ99877 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 HIST1H2BMQ99879 126 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 CST9LQ9H4G1 147 aa4.51□□□□□ -1.69
LPCAT3-209ENST00000540060 IGLV4-69A0A075B6H9 119 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 IGLV5-45A0A087WSX0 123 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 A0A0J9YXV3 536 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 TINCRA0A1B0GVN0 87 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 ATP5LO75964 103 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 APOMO95445 188 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 HERVK_113P63121 156 aa4.5□□□□□ -1.69
LPCAT3-209ENST00000540060 SEC11AP67812 179 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms