RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 H7C423 109 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 TMEM86BQ8N661 226 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 TRAV25A0A0B4J276 109 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 CRLF1O75462 422 aa9.94□□□□□ -0.82
UBE3B-210ENST00000539599 A0A096LPF7 62 aa9.93□□□□□ -0.82
UBE3B-210ENST00000539599 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
UBE3B-210ENST00000539599 HERVK_113P63121 156 aa9.93□□□□□ -0.82
UBE3B-210ENST00000539599 F5H768 121 aa9.93□□□□□ -0.82
UBE3B-210ENST00000539599 UBE2L6O14933 153 aa9.93□□□□□ -0.82
UBE3B-210ENST00000539599 TRGV4A0A0C4DH28 118 aa9.92□□□□□ -0.82
UBE3B-210ENST00000539599 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
UBE3B-210ENST00000539599 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
UBE3B-210ENST00000539599 C11orf68Q9H3H3 251 aaKnown RBP9.92□□□□□ -0.82
UBE3B-210ENST00000539599 CSNK1G2-AS1Q8NCQ2 148 aa9.92□□□□□ -0.82
UBE3B-210ENST00000539599 ATRQ13535 2644 aa9.92□□□□□ -0.82
UBE3B-210ENST00000539599 DAZ2Q13117 558 aaKnown RBP9.92□□□□□ -0.82
UBE3B-210ENST00000539599 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
UBE3B-210ENST00000539599 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
UBE3B-210ENST00000539599 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
UBE3B-210ENST00000539599 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
UBE3B-210ENST00000539599 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
UBE3B-210ENST00000539599 CKS1BP61024 79 aa9.91□□□□□ -0.82
UBE3B-210ENST00000539599 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
UBE3B-210ENST00000539599 DEFB4AO15263 64 aa9.9□□□□□ -0.82
UBE3B-210ENST00000539599 CLUHP3Q96NS8 147 aa9.9□□□□□ -0.82
UBE3B-210ENST00000539599 TRBV10-1A0A0K0K1A3 114 aa9.9□□□□□ -0.83
UBE3B-210ENST00000539599 CIDEAO60543 219 aa9.89□□□□□ -0.83
UBE3B-210ENST00000539599 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
UBE3B-210ENST00000539599 CHCHD5Q9BSY4 110 aa9.89□□□□□ -0.83
UBE3B-210ENST00000539599 RNASE1P07998 156 aaKnown RBP9.88□□□□□ -0.83
UBE3B-210ENST00000539599 SCGB1A1P11684 91 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
UBE3B-210ENST00000539599 FHL2Q14192 279 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 LINC00482Q8N8I6 264 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 LST1O00453 97 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 UBE2WQ96B02 151 aa9.88□□□□□ -0.83
UBE3B-210ENST00000539599 COX6CP09669 75 aa9.87□□□□□ -0.83
UBE3B-210ENST00000539599 TIMM17BO60830 172 aa9.86□□□□□ -0.83
UBE3B-210ENST00000539599 TTC32Q5I0X7 151 aa9.86□□□□□ -0.83
UBE3B-210ENST00000539599 Q8N3U1 123 aa9.86□□□□□ -0.83
UBE3B-210ENST00000539599 FAM218AQ96MZ4 157 aa9.86□□□□□ -0.83
UBE3B-210ENST00000539599 MIR7-3HGQ8N6C7 128 aa9.86□□□□□ -0.83
UBE3B-210ENST00000539599 IFITM1P13164 125 aa9.85□□□□□ -0.83
UBE3B-210ENST00000539599 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
UBE3B-210ENST00000539599 NSD1Q96L73 2696 aaPredicted RBP9.85□□□□□ -0.83
UBE3B-210ENST00000539599 PFN2P35080 140 aa9.85□□□□□ -0.83
UBE3B-210ENST00000539599 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
UBE3B-210ENST00000539599 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
UBE3B-210ENST00000539599 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
UBE3B-210ENST00000539599 Q9HAA7 133 aa9.83□□□□□ -0.84
UBE3B-210ENST00000539599 HIVEP1P15822 2718 aa9.83□□□□□ -0.84
UBE3B-210ENST00000539599 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
UBE3B-210ENST00000539599 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
UBE3B-210ENST00000539599 A0A1B0GV72 72 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 PF4P02776 101 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 RNF183Q96D59 192 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 GYPEP15421 78 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 XCL1P47992 114 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 OVOL2Q9BRP0 275 aa9.82□□□□□ -0.84
UBE3B-210ENST00000539599 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
UBE3B-210ENST00000539599 LINC00158P58513 81 aa9.81□□□□□ -0.84
UBE3B-210ENST00000539599 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
UBE3B-210ENST00000539599 HILS1P60008 231 aa9.81□□□□□ -0.84
UBE3B-210ENST00000539599 C15orf53Q8NAA6 179 aa9.81□□□□□ -0.84
UBE3B-210ENST00000539599 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-210ENST00000539599 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 PKD1L1Q8TDX9 2849 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 CITED1Q99966 193 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 M0QXV9 152 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 COX7A2LO14548 114 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
UBE3B-210ENST00000539599 SNCGO76070 127 aa9.79□□□□□ -0.84
UBE3B-210ENST00000539599 IGLV10-54A0A075B6I4 117 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 H3BT86 120 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 X6R8D5 127 aa9.78□□□□□ -0.84
UBE3B-210ENST00000539599 ANK2Q01484 3957 aa9.77□□□□□ -0.85
UBE3B-210ENST00000539599 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
UBE3B-210ENST00000539599 ATP5G1P05496 136 aa9.77□□□□□ -0.85
UBE3B-210ENST00000539599 CCL18P55774 89 aa9.77□□□□□ -0.85
UBE3B-210ENST00000539599 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
UBE3B-210ENST00000539599 PRR3P79522 188 aaKnown RBP9.76□□□□□ -0.85
UBE3B-210ENST00000539599 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
UBE3B-210ENST00000539599 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
UBE3B-210ENST00000539599 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
UBE3B-210ENST00000539599 A0A087WYN8 130 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 HERV-K104P63124 156 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 LY6G6DO95868 133 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms