RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 TRAV13-1A0A0B4J241 112 aa6.21□□□□□ -1.42
RTN4IP1-204ENST00000539449 TRAV8-6A0A0B4J262 113 aa6.21□□□□□ -1.42
RTN4IP1-204ENST00000539449 IGLC3P0DOY3 106 aa6.21□□□□□ -1.42
RTN4IP1-204ENST00000539449 MRPS16Q9Y3D3 137 aaKnown RBP6.21□□□□□ -1.42
RTN4IP1-204ENST00000539449 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 NUPR2A6NF83 97 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 SMAGPQ0VAQ4 97 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 PAPPA-AS1Q5QFB9 102 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 LINC00269Q8N2A0 174 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 CHAC1Q9BUX1 264 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 PRO1933Q9H354 126 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 KLK12Q9UKR0 248 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 PAM16Q9Y3D7 125 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
RTN4IP1-204ENST00000539449 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 ANGP03950 147 aaKnown RBP6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 SPATA45Q537H7 98 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 HSPG2P98160 4391 aa6.19□□□□□ -1.42
RTN4IP1-204ENST00000539449 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 CCL18P55774 89 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 C2orf88Q9BSF0 95 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 TP73-AS1Q9UF72 201 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 KLK5Q9Y337 293 aaPredicted RBP6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
RTN4IP1-204ENST00000539449 IGLV10-54A0A075B6I4 117 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 PLNP26678 52 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 REG3AQ06141 175 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 LINC01556Q5JQF7 62 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 TMEM170BQ5T4T1 132 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 TTTY13Q9BZ97 58 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 PRR34Q9NV39 138 aa6.17□□□□□ -1.42
RTN4IP1-204ENST00000539449 IGHV3-64A0A075B6Q5 118 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 TRAV8-3A0A0A6YYJ7 113 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 SIVA1O15304 175 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 CCL25O15444 150 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 SPINK8P0C7L1 97 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 PKIAP61925 76 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 S100A12P80511 92 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
RTN4IP1-204ENST00000539449 XCL1P47992 114 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 SS18Q15532 418 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 KRTAP26-1Q6PEX3 210 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 UBE2DNLQ8IWF7 75 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 LINC00469Q8N7U9 141 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 KRTAP1-5Q9BYS1 174 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 Q9H8V8 135 aa6.15□□□□□ -1.42
RTN4IP1-204ENST00000539449 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
RTN4IP1-204ENST00000539449 IGHV3OR16-9A0A0B4J2B5 98 aa6.14□□□□□ -1.43
RTN4IP1-204ENST00000539449 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
RTN4IP1-204ENST00000539449 HERVK_113P63121 156 aa6.14□□□□□ -1.43
RTN4IP1-204ENST00000539449 PKD1P98161 4303 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 HSBP1L1C9JCN9 74 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 E9PLD3 99 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 NMUP48645 174 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 FOXI1Q12951 378 aa6.13□□□□□ -1.43
RTN4IP1-204ENST00000539449 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 SMIM1B2RUZ4 78 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 LEPROTO15243 131 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 COX8AP10176 69 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 SEC11AP67812 179 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 Q9HAA7 133 aa6.12□□□□□ -1.43
RTN4IP1-204ENST00000539449 A0A087WZ39 114 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 IGLV5-39A0A0G2JS06 123 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 PCP4L1A6NKN8 68 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 CRPP02741 224 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 CD164L2Q6UWJ8 174 aa6.11□□□□□ -1.43
RTN4IP1-204ENST00000539449 H3BRM9 83 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 J3QQQ9 107 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 HERVK_113P61574 105 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 MIAQ16674 131 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 BOD1L2Q8IYS8 172 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
RTN4IP1-204ENST00000539449 IGKV2D-24A0A075B6R9 120 aa6.09□□□□□ -1.43
RTN4IP1-204ENST00000539449 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
RTN4IP1-204ENST00000539449 C2orf91Q6ZV80 131 aa6.09□□□□□ -1.43
RTN4IP1-204ENST00000539449 MIEN1Q9BRT3 115 aa6.09□□□□□ -1.43
RTN4IP1-204ENST00000539449 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms