RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 A0A087WX48 190 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 IGHV3-73A0A0B4J1V6 119 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 TRAV12-1A0A0B4J245 112 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 TRAV21A0A0B4J279 112 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 MYMXA0A1B0GTQ4 84 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 EPM2AB3EWF7 344 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 K7EMI3 77 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 PAX4O43316 350 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
LMO3-220ENST00000539232 TRGV11A0A075B6L2 103 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 SH2D1AO60880 128 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 NPYP01303 97 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 ARMS2P0C7Q2 107 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 FUSP35637 526 aaKnown RBP eCLIP4.94□□□□□ -1.62
LMO3-220ENST00000539232 UBE2D1P51668 147 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 CCL18P55774 89 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 C1orf134Q5TEV5 83 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 PTH2Q96A98 100 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 Q9H8V8 135 aa4.94□□□□□ -1.62
LMO3-220ENST00000539232 TMSB15BA0A087X1C1 80 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 A0A1B0GX51 115 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 D6R8Y8 96 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 H3BNG1 76 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 K7EQD1 137 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 K7ERJ3 54 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 M0R2P5 195 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 NXPH4O95158 308 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 GYPEP15421 78 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 RPL13AP40429 203 aaKnown RBP4.93□□□□□ -1.62
LMO3-220ENST00000539232 ZNF876PQ49A33 203 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 MRPL51Q4U2R6 128 aaKnown RBP4.93□□□□□ -1.62
LMO3-220ENST00000539232 ZC2HC1BQ5TFG8 222 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 LYPD5Q6UWN5 251 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 Q8N3U1 123 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 DNAJC30Q96LL9 226 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 CNFNQ9BYD5 112 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 PRO0255Q9UI72 69 aa4.93□□□□□ -1.62
LMO3-220ENST00000539232 TRAV4A0A0B4J268 109 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 TRGV4A0A0C4DH28 118 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 J3QL48 77 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 RS1O15537 224 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 PRSS1P07477 247 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 GATA1P15976 413 aaPredicted RBP4.92□□□□□ -1.62
LMO3-220ENST00000539232 CKS2P33552 79 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 SMCPP49901 116 aaPredicted RBP4.92□□□□□ -1.62
LMO3-220ENST00000539232 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
LMO3-220ENST00000539232 PAPPA-AS1Q5QFB9 102 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 WFDC10BQ8IUB3 73 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 AMN1Q8IY45 258 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 Q8N8P6 123 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
LMO3-220ENST00000539232 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 IGKV2D-26A0A0A0MRZ7 120 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 H3BVH4 76 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 H7C1H1 209 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 ORM1P02763 201 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 KRTAP10-2P60368 255 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
LMO3-220ENST00000539232 C6orf223Q8N319 242 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 C14orf178Q8N769 122 aaPredicted RBP4.91□□□□□ -1.62
LMO3-220ENST00000539232 SLC25A29Q8N8R3 303 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 CARD19Q96LW7 228 aa4.91□□□□□ -1.62
LMO3-220ENST00000539232 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.62
LMO3-220ENST00000539232 F8VRH5 84 aa4.9□□□□□ -1.63
LMO3-220ENST00000539232 LINC00315P59091 139 aa4.9□□□□□ -1.63
LMO3-220ENST00000539232 A0A087WWL8 130 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 ACYP1P07311 99 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 CRYGDP07320 174 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 PSMB2P49721 201 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 LAGE3Q14657 143 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 LYZL1Q6UWQ5 148 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
LMO3-220ENST00000539232 NACAE9PAV3 2078 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 M0R381 172 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 SLC25A20O43772 301 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 IGLC6P0CF74 106 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 DNAH10OSP0CZ25 163 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 LINC00694P0DN24 101 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 HERVK_113P61574 105 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 ORMDL2Q53FV1 153 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 C10orf126Q8N4M7 172 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
LMO3-220ENST00000539232 TRAV8-4A0A0B4J246 113 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 LOC107984156A0A0G2JMH3 177 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 J3KT08 172 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms