RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CRYBG3Q68DQ2 2970 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 NFAT5O94916 1531 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 TMSB15BA0A087X1C1 80 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 C20orf202A1L168 122 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 H3BMG7 143 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 NFYBP25208 207 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 FAM74A1Q5RGS3 127 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 BPIFA4PQ86YQ2 179 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 POP5Q969H6 163 aaKnown RBP0.37□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00052Q96N35 136 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 VPS25Q9BRG1 176 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 ATRQ13535 2644 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 IGF2RP11717 2491 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 DNAH11Q96DT5 4516 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV2-40A0A087WW87 121 aaPredicted RBP0.37□□□□□ -2.35
HIF1A-204ENST00000539097 LOC101927531A0A1B0GV80 90 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 OR2T8A6NH00 312 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 LYZL6O75951 148 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV2D-40P01614 121 aaPredicted RBP0.37□□□□□ -2.35
HIF1A-204ENST00000539097 CCKP06307 115 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 PAEPP09466 180 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 UBE2D3P61077 147 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 RPL26P61254 145 aaKnown RBP0.37□□□□□ -2.35
HIF1A-204ENST00000539097 UBE2D2P62837 147 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 UBE2BP63146 152 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 C1orf137Q5JT78 98 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 C1orf134Q5TEV5 83 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 FAM27BQ5VT28 67 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 SOSTDC1Q6X4U4 206 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 ARPINQ7Z6K5 226 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 KCNRGQ8N5I3 272 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 ATP6V0E2Q8NHE4 81 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 HYLS1Q96M11 299 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 DSCR8Q96T75 97 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 TIMM21Q9BVV7 248 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 ULBP3Q9BZM4 244 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 LY96Q9Y6Y9 160 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 KTN1Q86UP2 1357 aaKnown RBP0.37□□□□□ -2.35
HIF1A-204ENST00000539097 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 COL12A1Q99715 3063 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 TCRBV4S1A1TA0A5B7 111 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 SDC2P34741 201 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 CDK5R1Q15078 307 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 MYO7BQ6PIF6 2116 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 BPESC1Q9GZL8 116 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00472Q9H8W2 130 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 SAR1AQ9NR31 198 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 CDC42SE2Q9NRR3 84 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 NAV3Q8IVL0 2385 aa0.37□□□□□ -2.35
HIF1A-204ENST00000539097 FAT1Q14517 4588 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 ITPR2Q14571 2701 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV3-7A0A075B6H7 116 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 RER1O15258 196 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 NDUFB6O95139 128 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 SSR2P43308 183 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 MRPS10P82664 201 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 IQCJQ1A5X6 159 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 C8orf59Q8N0T1 100 aaPredicted RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 OR4B1Q8NGF8 309 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF714Q96N38 554 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 CACFD1Q9UGQ2 172 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 TLN1Q9Y490 2541 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 NCOR2Q9Y618 2525 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 F8P00451 2351 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 APOBP04114 4563 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV1D-42A0A075B6H8 117 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 LCE6AA0A183 80 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 A0A1W2PPM0 123 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 TCRBV3S1A0A5B6 114 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 CD2P06729 351 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 COX7CP15954 63 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 S100A4P26447 101 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 RHEBQ15382 184 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 BCL2L15Q5TBC7 163 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 TSTD1Q8NFU3 115 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 Q8TAT8 98 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 C10orf82Q8WW14 230 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 SMIM3Q9BZL3 60 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 AKAP13Q12802 2813 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 POLQO75417 2590 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 MXRA5Q9NR99 2828 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 NDUFB3O43676 98 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 HIST1H2BKO60814 126 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 HIST1H2BJP06899 126 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 PYYP10082 97 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 SLC25A6P12236 298 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 UBE2D1P51668 147 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 MRPS36P82909 103 aaKnown RBP0.36□□□□□ -2.35
HIF1A-204ENST00000539097 DEFB113Q30KQ7 82 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 CLLU1Q5K131 121 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 COL5A1-AS1Q5SY13 56 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 LINC01545Q5VT33 79 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 Q96M85 177 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 HIST1H2BLQ99880 126 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 C20orf78Q9BR46 151 aa0.36□□□□□ -2.35
HIF1A-204ENST00000539097 MED13LQ71F56 2210 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 TRGV2A0A075B6R0 118 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 TEX49A0A1B0GTD5 131 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms