RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
CPNE8-203ENST00000538596 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
CPNE8-203ENST00000538596 LINC01006Q8NI28 216 aa8.49□□□□□ -1.05
CPNE8-203ENST00000538596 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
CPNE8-203ENST00000538596 TRGV2A0A075B6R0 118 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 COX6CP09669 75 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
CPNE8-203ENST00000538596 VWFP04275 2813 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 F5H768 121 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 IFITM1P13164 125 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 PRIMA1Q86XR5 153 aa8.48□□□□□ -1.05
CPNE8-203ENST00000538596 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
CPNE8-203ENST00000538596 LST1O00453 97 aa8.47□□□□□ -1.05
CPNE8-203ENST00000538596 CRLF1O75462 422 aa8.47□□□□□ -1.05
CPNE8-203ENST00000538596 UBE2WQ96B02 151 aa8.47□□□□□ -1.05
CPNE8-203ENST00000538596 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
CPNE8-203ENST00000538596 TMEM262E9PQX1 116 aa8.46□□□□□ -1.05
CPNE8-203ENST00000538596 UBE2L6O14933 153 aa8.46□□□□□ -1.05
CPNE8-203ENST00000538596 RNF183Q96D59 192 aa8.46□□□□□ -1.05
CPNE8-203ENST00000538596 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
CPNE8-203ENST00000538596 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
CPNE8-203ENST00000538596 GAGE6Q13070 117 aa8.45□□□□□ -1.06
CPNE8-203ENST00000538596 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
CPNE8-203ENST00000538596 SVIPQ8NHG7 77 aa8.45□□□□□ -1.06
CPNE8-203ENST00000538596 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
CPNE8-203ENST00000538596 OTOGQ6ZRI0 2925 aa8.44□□□□□ -1.06
CPNE8-203ENST00000538596 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
CPNE8-203ENST00000538596 TRGV4A0A0C4DH28 118 aa8.44□□□□□ -1.06
CPNE8-203ENST00000538596 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
CPNE8-203ENST00000538596 C16orf74Q96GX8 76 aa8.44□□□□□ -1.06
CPNE8-203ENST00000538596 IGLV4-60A0A075B6I1 120 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 IGLV1-51P01701 117 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 SMR3AQ99954 134 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 CITED1Q99966 193 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
CPNE8-203ENST00000538596 H3BT86 120 aa8.42□□□□□ -1.06
CPNE8-203ENST00000538596 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
CPNE8-203ENST00000538596 TEX29Q8N6K0 151 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 HIVEP2P31629 2446 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 SNCGO76070 127 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 FHL2Q14192 279 aa8.41□□□□□ -1.06
CPNE8-203ENST00000538596 TRBV6-4A0A1B0GX49 114 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
CPNE8-203ENST00000538596 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 COX7A2LO14548 114 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 TTC32Q5I0X7 151 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
CPNE8-203ENST00000538596 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.07
CPNE8-203ENST00000538596 OVOL2Q9BRP0 275 aa8.4□□□□□ -1.07
CPNE8-203ENST00000538596 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
CPNE8-203ENST00000538596 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
CPNE8-203ENST00000538596 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
CPNE8-203ENST00000538596 C16orf95Q9H693 158 aa8.39□□□□□ -1.07
CPNE8-203ENST00000538596 HERV-K104P63124 156 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
CPNE8-203ENST00000538596 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
CPNE8-203ENST00000538596 C11orf68Q9H3H3 251 aaKnown RBP8.37□□□□□ -1.07
CPNE8-203ENST00000538596 TENM1Q9UKZ4 2725 aa8.37□□□□□ -1.07
CPNE8-203ENST00000538596 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
CPNE8-203ENST00000538596 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
CPNE8-203ENST00000538596 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 A0A096LPF7 62 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
CPNE8-203ENST00000538596 KRTAP10-3P60369 221 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 LINC00158P58513 81 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 Q9HAA7 133 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 PFN2P35080 140 aa8.36□□□□□ -1.07
CPNE8-203ENST00000538596 DEFB121Q5J5C9 76 aa8.35□□□□□ -1.07
CPNE8-203ENST00000538596 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
CPNE8-203ENST00000538596 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
CPNE8-203ENST00000538596 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
CPNE8-203ENST00000538596 SPATA3Q8NHX4 192 aa8.35□□□□□ -1.07
CPNE8-203ENST00000538596 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
CPNE8-203ENST00000538596 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
CPNE8-203ENST00000538596 GYPEP15421 78 aa8.34□□□□□ -1.07
CPNE8-203ENST00000538596 NDUFV3P56181 108 aaKnown RBP8.34□□□□□ -1.07
CPNE8-203ENST00000538596 BAALC-AS2P0C853 105 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 CCL18P55774 89 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 CRPP02741 224 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 XCL1P47992 114 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 HILS1P60008 231 aa8.33□□□□□ -1.08
CPNE8-203ENST00000538596 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
CPNE8-203ENST00000538596 A0A087WZ39 114 aa8.32□□□□□ -1.08
CPNE8-203ENST00000538596 DEFB4AO15263 64 aa8.32□□□□□ -1.08
CPNE8-203ENST00000538596 LINC00482Q8N8I6 264 aa8.32□□□□□ -1.08
CPNE8-203ENST00000538596 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms