RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
CLIP1-210ENST00000538120 C20orf203Q8NBC4 194 aa7.69□□□□□ -1.18
CLIP1-210ENST00000538120 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
CLIP1-210ENST00000538120 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
CLIP1-210ENST00000538120 SLC25A20O43772 301 aa7.68□□□□□ -1.18
CLIP1-210ENST00000538120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-210ENST00000538120 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
CLIP1-210ENST00000538120 LEPROTO15243 131 aa7.68□□□□□ -1.18
CLIP1-210ENST00000538120 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
CLIP1-210ENST00000538120 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-210ENST00000538120 CD164L2Q6UWJ8 174 aa7.67□□□□□ -1.18
CLIP1-210ENST00000538120 Q6ZTI0 123 aa7.67□□□□□ -1.18
CLIP1-210ENST00000538120 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
CLIP1-210ENST00000538120 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
CLIP1-210ENST00000538120 FAM104AQ969W3 186 aa7.67□□□□□ -1.18
CLIP1-210ENST00000538120 JMJD1CQ15652 2540 aa7.66□□□□□ -1.18
CLIP1-210ENST00000538120 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
CLIP1-210ENST00000538120 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
CLIP1-210ENST00000538120 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
CLIP1-210ENST00000538120 DAZ2Q13117 558 aaKnown RBP7.66□□□□□ -1.18
CLIP1-210ENST00000538120 NOP10Q9NPE3 64 aaKnown RBP7.66□□□□□ -1.18
CLIP1-210ENST00000538120 PRO0628Q9UI54 55 aa7.66□□□□□ -1.18
CLIP1-210ENST00000538120 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
CLIP1-210ENST00000538120 Q1RN00 199 aa7.65□□□□□ -1.18
CLIP1-210ENST00000538120 NTN5Q8WTR8 489 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-210ENST00000538120 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CLIP1-210ENST00000538120 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
CLIP1-210ENST00000538120 A0A1B0GX51 115 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-210ENST00000538120 VWFP04275 2813 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 NPC2P61916 151 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 C16orf74Q96GX8 76 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
CLIP1-210ENST00000538120 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 IGHV3-38A0A0C4DH36 116 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 TEX49A0A1B0GTD5 131 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 J3KT08 172 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 LITAFQ99732 161 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 OVOL2Q9BRP0 275 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 PYGO1Q9Y3Y4 419 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 TRIAP1O43715 76 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 OXTP01178 125 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
CLIP1-210ENST00000538120 C9orf66Q5T8R8 295 aa7.63□□□□□ -1.19
CLIP1-210ENST00000538120 PRSS2P07478 247 aa7.62□□□□□ -1.19
CLIP1-210ENST00000538120 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
CLIP1-210ENST00000538120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-210ENST00000538120 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-210ENST00000538120 TMEM262E9PQX1 116 aa7.61□□□□□ -1.19
CLIP1-210ENST00000538120 UBE2D4Q9Y2X8 147 aa7.61□□□□□ -1.19
CLIP1-210ENST00000538120 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-210ENST00000538120 K7EQD1 137 aa7.6□□□□□ -1.19
CLIP1-210ENST00000538120 NHLRC4P0CG21 123 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-210ENST00000538120 ATXN8Q156A1 80 aa7.6□□□□□ -1.19
CLIP1-210ENST00000538120 XP32Q5T750 250 aa7.6□□□□□ -1.19
CLIP1-210ENST00000538120 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
CLIP1-210ENST00000538120 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.19
CLIP1-210ENST00000538120 WFDC9Q8NEX5 89 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 FAM19A1Q7Z5A9 133 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 DAND5Q8N907 189 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 CLEC2BQ92478 149 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 TMEM101Q96IK0 257 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
CLIP1-210ENST00000538120 TRGV2A0A075B6R0 118 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 TRBV30A0A0K0K1B3 111 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
CLIP1-210ENST00000538120 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
CLIP1-210ENST00000538120 ICOSQ9Y6W8 199 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
CLIP1-210ENST00000538120 H7C423 109 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 FHL2Q14192 279 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 SNCGO76070 127 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 VSIG2Q96IQ7 327 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 NOTCH3Q9UM47 2321 aa7.57□□□□□ -1.2
CLIP1-210ENST00000538120 TRBV6-4A0A1B0GX49 114 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 CCDC179H3BU77 68 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 C2orf82Q6UX34 121 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 DAZ4Q86SG3 579 aaKnown RBP7.56□□□□□ -1.2
CLIP1-210ENST00000538120 DAZ3Q9NR90 486 aaKnown RBP7.56□□□□□ -1.2
CLIP1-210ENST00000538120 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 UBE2WQ96B02 151 aa7.56□□□□□ -1.2
CLIP1-210ENST00000538120 TEP1Q99973 2627 aaKnown RBP7.56□□□□□ -1.2
CLIP1-210ENST00000538120 ATRQ13535 2644 aa7.55□□□□□ -1.2
CLIP1-210ENST00000538120 RPL13AP40429 203 aaKnown RBP7.55□□□□□ -1.2
CLIP1-210ENST00000538120 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
CLIP1-210ENST00000538120 MIAQ16674 131 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms