RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CXCL5P42830 114 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
CPSF7-218ENST00000537641 ITPR3Q14573 2671 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 TRAV13-1A0A0B4J241 112 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 C1orf158Q8N1D5 194 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
CPSF7-218ENST00000537641 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 CRPP02741 224 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 KHDC1LQ5JSQ8 128 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.03
CPSF7-218ENST00000537641 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 ODF3L2Q3SX64 289 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 STHQ8IWL8 128 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 SMCR5Q8TEV8 140 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 TMEM243Q9BU79 118 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 SORL1Q92673 2214 aa8.64□□□□□ -1.03
CPSF7-218ENST00000537641 UBE2L6O14933 153 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 NDUFA7O95182 113 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 MYO9AB2RTY4 2548 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 MALP21145 153 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
CPSF7-218ENST00000537641 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
CPSF7-218ENST00000537641 COX7B2Q8TF08 81 aa8.62□□□□□ -1.03
CPSF7-218ENST00000537641 Q6ZTI0 123 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 TLN2Q9Y4G6 2542 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 UQCRQO14949 82 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
CPSF7-218ENST00000537641 H0YGX0 51 aa8.59□□□□□ -1.03
CPSF7-218ENST00000537641 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
CPSF7-218ENST00000537641 ESM1Q9NQ30 184 aa8.59□□□□□ -1.03
CPSF7-218ENST00000537641 FLNAP21333 2647 aaKnown RBP8.59□□□□□ -1.03
CPSF7-218ENST00000537641 ZNF469Q96JG9 3925 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-218ENST00000537641 IGKV2-28A0A075B6P5 120 aa8.58□□□□□ -1.04
CPSF7-218ENST00000537641 TRBV6-4A0A1B0GX49 114 aa8.58□□□□□ -1.04
CPSF7-218ENST00000537641 DNAL4O96015 105 aa8.58□□□□□ -1.04
CPSF7-218ENST00000537641 IGKV2D-28P01615 120 aa8.58□□□□□ -1.04
CPSF7-218ENST00000537641 CMC4P56277 68 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-218ENST00000537641 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
CPSF7-218ENST00000537641 AKAP9Q99996 3911 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 C16orf74Q96GX8 76 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 J3QKU1 62 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 LINC00526Q96FQ7 95 aa8.57□□□□□ -1.04
CPSF7-218ENST00000537641 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 CCL24O00175 119 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 ATOX1O00244 68 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 HIST1H4AP62805 103 aaKnown RBP8.56□□□□□ -1.04
CPSF7-218ENST00000537641 SMIM11BQ8TCY0 68 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 Q9HAA7 133 aa8.56□□□□□ -1.04
CPSF7-218ENST00000537641 SONP18583 2426 aaKnown RBP8.56□□□□□ -1.04
CPSF7-218ENST00000537641 RNASE1P07998 156 aaKnown RBP8.55□□□□□ -1.04
CPSF7-218ENST00000537641 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
CPSF7-218ENST00000537641 PDZD2O15018 2839 aa8.55□□□□□ -1.04
CPSF7-218ENST00000537641 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 COX7CP15954 63 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 CCL18P55774 89 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 LINC00158P58513 81 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 Q6JHZ5 121 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 CCDC168Q8NDH2 2452 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 A0A087WYN8 130 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 PLAC8L1A1L4L8 177 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
CPSF7-218ENST00000537641 A0A087WZ39 114 aa8.53□□□□□ -1.04
CPSF7-218ENST00000537641 C11orf44Q8N8P7 122 aa8.53□□□□□ -1.04
CPSF7-218ENST00000537641 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-218ENST00000537641 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.04
CPSF7-218ENST00000537641 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
CPSF7-218ENST00000537641 LY6G6DO95868 133 aa8.52□□□□□ -1.05
CPSF7-218ENST00000537641 LINC01006Q8NI28 216 aa8.52□□□□□ -1.05
CPSF7-218ENST00000537641 TRBV6-8A0A0A6YYG3 113 aa8.51□□□□□ -1.05
CPSF7-218ENST00000537641 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
CPSF7-218ENST00000537641 LOC100131303A0A0U1RQF7 123 aa8.51□□□□□ -1.05
CPSF7-218ENST00000537641 A0A1B0GX51 115 aa8.51□□□□□ -1.05
CPSF7-218ENST00000537641 GIG44P09565 113 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-218ENST00000537641 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
CPSF7-218ENST00000537641 IGLV4-60A0A075B6I1 120 aa8.5□□□□□ -1.05
CPSF7-218ENST00000537641 CRYGAP11844 174 aa8.5□□□□□ -1.05
CPSF7-218ENST00000537641 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
CPSF7-218ENST00000537641 C3orf56Q8N813 242 aa8.5□□□□□ -1.05
CPSF7-218ENST00000537641 WNK1Q9H4A3 2382 aa8.5□□□□□ -1.05
CPSF7-218ENST00000537641 NF1P21359 2839 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms