RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CCDC168Q8NDH2 2452 aa10.14□□□□□ -0.79
USP44-203ENST00000537435 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
USP44-203ENST00000537435 IGLV1-51P01701 117 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 PLA2G2AP14555 144 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 C2CD3Q4AC94 2353 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 NF1P21359 2839 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 HERV-K104P63124 156 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 C16orf95Q9H693 158 aa10.13□□□□□ -0.79
USP44-203ENST00000537435 TRGV4A0A0C4DH28 118 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 RNASE1P07998 156 aaKnown RBP10.12□□□□□ -0.79
USP44-203ENST00000537435 KRTAP1-1Q07627 177 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 CSNK1G2-AS1Q8NCQ2 148 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 CITED1Q99966 193 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
USP44-203ENST00000537435 NBPF19A0A087WUL8 3843 aa10.11□□□□□ -0.79
USP44-203ENST00000537435 GAGE6Q13070 117 aa10.11□□□□□ -0.79
USP44-203ENST00000537435 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 COX7A2LO14548 114 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 FLNAP21333 2647 aaKnown RBP10.1□□□□□ -0.79
USP44-203ENST00000537435 CRLF1O75462 422 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 SNCGO76070 127 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
USP44-203ENST00000537435 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
USP44-203ENST00000537435 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
USP44-203ENST00000537435 FHL2Q14192 279 aa10.08□□□□□ -0.8
USP44-203ENST00000537435 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
USP44-203ENST00000537435 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 CHCHD5Q9BSY4 110 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
USP44-203ENST00000537435 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
USP44-203ENST00000537435 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
USP44-203ENST00000537435 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
USP44-203ENST00000537435 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
USP44-203ENST00000537435 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
USP44-203ENST00000537435 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
USP44-203ENST00000537435 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
USP44-203ENST00000537435 ACANP16112 2415 aa10.04□□□□□ -0.8
USP44-203ENST00000537435 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
USP44-203ENST00000537435 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
USP44-203ENST00000537435 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
USP44-203ENST00000537435 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
USP44-203ENST00000537435 TTC32Q5I0X7 151 aa10.02□□□□□ -0.8
USP44-203ENST00000537435 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.8
USP44-203ENST00000537435 TRAV13-2A0A0B4J235 113 aa10.02□□□□□ -0.81
USP44-203ENST00000537435 TRACP01848 142 aa10.02□□□□□ -0.81
USP44-203ENST00000537435 LINC00158P58513 81 aa10.02□□□□□ -0.81
USP44-203ENST00000537435 HILS1P60008 231 aa10.02□□□□□ -0.81
USP44-203ENST00000537435 MTORP42345 2549 aa10.02□□□□□ -0.81
USP44-203ENST00000537435 CRPP02741 224 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 Q6Q795 121 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 PF4P02776 101 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 LINC00337Q8N6G1 96 aa10.01□□□□□ -0.81
USP44-203ENST00000537435 IGKV2-28A0A075B6P5 120 aa10□□□□□ -0.81
USP44-203ENST00000537435 A0A087WZ39 114 aa10□□□□□ -0.81
USP44-203ENST00000537435 IGKV2D-28P01615 120 aa10□□□□□ -0.81
USP44-203ENST00000537435 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
USP44-203ENST00000537435 BAALC-AS2P0C853 105 aa9.99□□□□□ -0.81
USP44-203ENST00000537435 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
USP44-203ENST00000537435 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
USP44-203ENST00000537435 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
USP44-203ENST00000537435 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
USP44-203ENST00000537435 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
USP44-203ENST00000537435 GYPEP15421 78 aa9.98□□□□□ -0.81
USP44-203ENST00000537435 PDZD2O15018 2839 aa9.98□□□□□ -0.81
USP44-203ENST00000537435 CCL18P55774 89 aa9.98□□□□□ -0.81
USP44-203ENST00000537435 KRTAP10-3P60369 221 aa9.98□□□□□ -0.81
USP44-203ENST00000537435 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
USP44-203ENST00000537435 PFN2P35080 140 aa9.97□□□□□ -0.81
USP44-203ENST00000537435 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
USP44-203ENST00000537435 Q9HAA7 133 aa9.97□□□□□ -0.81
USP44-203ENST00000537435 C22orf24Q9Y442 160 aa9.96□□□□□ -0.81
USP44-203ENST00000537435 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
USP44-203ENST00000537435 C11orf68Q9H3H3 251 aaKnown RBP9.96□□□□□ -0.82
USP44-203ENST00000537435 XCL1P47992 114 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 LINC00482Q8N8I6 264 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 X6R8D5 127 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 ACYP1P07311 99 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 SMR3AQ99954 134 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 TENM4Q6N022 2769 aa9.95□□□□□ -0.82
USP44-203ENST00000537435 A0A096LPF7 62 aa9.94□□□□□ -0.82
USP44-203ENST00000537435 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
USP44-203ENST00000537435 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
USP44-203ENST00000537435 SS18Q15532 418 aa9.93□□□□□ -0.82
USP44-203ENST00000537435 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
USP44-203ENST00000537435 PAX4O43316 350 aa9.93□□□□□ -0.82
USP44-203ENST00000537435 PRO0255Q9UI72 69 aa9.93□□□□□ -0.82
USP44-203ENST00000537435 A0A087WYN8 130 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms