RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PGLYRP4Q96LB8 373 aa5.09□□□□□ -1.59
CPSF7-217ENST00000537162 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
CPSF7-217ENST00000537162 HMGB3O15347 200 aaKnown RBP5.08□□□□□ -1.6
CPSF7-217ENST00000537162 MT1FP04733 61 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 ARL14EPLP0DKL9 152 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 PNRC1Q12796 327 aaPredicted RBP5.08□□□□□ -1.6
CPSF7-217ENST00000537162 FAM74A3Q4VXF1 159 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 C9orf129Q5T035 196 aaKnown RBP5.08□□□□□ -1.6
CPSF7-217ENST00000537162 SUMO4Q6EEV6 95 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 SVBPQ8N300 66 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 C5orf17Q8NAS9 161 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 OR2D3Q8NGH3 330 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 C11orf52Q96A22 123 aa5.08□□□□□ -1.6
CPSF7-217ENST00000537162 BCE1O60756 84 aa5.07□□□□□ -1.6
CPSF7-217ENST00000537162 SMIM12Q96EX1 92 aa5.07□□□□□ -1.6
CPSF7-217ENST00000537162 EIF5A2Q9GZV4 153 aaKnown RBP5.07□□□□□ -1.6
CPSF7-217ENST00000537162 GNG13Q9P2W3 67 aa5.07□□□□□ -1.6
CPSF7-217ENST00000537162 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 FAM74A7A6NL05 159 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 K7EQM0 130 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 SNAPINO95295 136 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 APOC3P02656 99 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 COTL1Q14019 142 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 EPDR1Q9UM22 224 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
CPSF7-217ENST00000537162 S100A9P06702 114 aaKnown RBP5.05□□□□□ -1.6
CPSF7-217ENST00000537162 MGPP08493 103 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 SRP19P09132 144 aaKnown RBP5.05□□□□□ -1.6
CPSF7-217ENST00000537162 CCL20P78556 96 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 RHEBQ15382 184 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 HIST1H2BAQ96A08 127 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 IMMP2LQ96T52 175 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 MRPL35Q9NZE8 188 aaKnown RBP5.05□□□□□ -1.6
CPSF7-217ENST00000537162 C6orf48Q9UBA6 75 aa5.05□□□□□ -1.6
CPSF7-217ENST00000537162 F8W036 122 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 COX7A2LO14548 114 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 ADCYAP1P18509 176 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 UNQ6190/PRO20217Q6UXQ8 127 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 Q86TA4 180 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 C22orf24Q9Y442 160 aa5.04□□□□□ -1.6
CPSF7-217ENST00000537162 PAGE4O60829 102 aa5.03□□□□□ -1.6
CPSF7-217ENST00000537162 SCO1O75880 301 aa5.03□□□□□ -1.6
CPSF7-217ENST00000537162 C5orf38Q86SI9 138 aa5.03□□□□□ -1.6
CPSF7-217ENST00000537162 TMEM242Q9NWH2 141 aa5.03□□□□□ -1.6
CPSF7-217ENST00000537162 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
CPSF7-217ENST00000537162 C9JQL5 133 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 SNAI2O43623 268 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 NTF3P20783 257 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 CTRLP40313 264 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 SPANXN1Q5VSR9 72 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 CST9LP1Q5W188 147 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 RASL11AQ6T310 242 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 BIN3Q9NQY0 253 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
CPSF7-217ENST00000537162 A0A1B0GV50 99 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 ZNF727A8MUV8 499 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 PEX7O00628 323 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 SMIM17P0DL12 118 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 FMC1Q96HJ9 113 aa5.01□□□□□ -1.61
CPSF7-217ENST00000537162 PPP1R2P9O14990 202 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 TRIAP1O43715 76 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 AKR1C3P42330 323 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 UBE2G2P60604 165 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 TMEM241Q24JQ0 296 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 LINC01551Q86U37 167 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 AP1S3Q96PC3 154 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 NIT2Q9NQR4 276 aa5□□□□□ -1.61
CPSF7-217ENST00000537162 TRBV20OR9-2A0A075B6H5 130 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 LTAP01374 205 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 OR5AL1P0C617 328 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 RPL35P42766 123 aaKnown RBP4.99□□□□□ -1.61
CPSF7-217ENST00000537162 Q8N377 158 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 Q8NBF4 154 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 BTF3L4Q96K17 158 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 SMCO4Q9NRQ5 59 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 ZFP30Q9Y2G7 519 aa4.99□□□□□ -1.61
CPSF7-217ENST00000537162 H7C423 109 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 NDUFA1O15239 70 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 MT-ND4LP03901 98 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 ZNF25P17030 456 aaPredicted RBP4.98□□□□□ -1.61
CPSF7-217ENST00000537162 GNG4P50150 75 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 UBE2G1P62253 170 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 Q6Q795 121 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 FAM231DQ6ZW35 169 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 CDC42SE2Q9NRR3 84 aa4.98□□□□□ -1.61
CPSF7-217ENST00000537162 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
CPSF7-217ENST00000537162 C7orf77A4D0Y5 90 aa4.97□□□□□ -1.61
CPSF7-217ENST00000537162 UBE2AP49459 152 aa4.97□□□□□ -1.61
CPSF7-217ENST00000537162 RAB5BP61020 215 aa4.97□□□□□ -1.61
CPSF7-217ENST00000537162 RPL23P62829 140 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms