RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 CDC42SE2Q9NRR3 84 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 LAMTOR3Q9UHA4 124 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 TLN1Q9Y490 2541 aaKnown RBP4.06□□□□□ -1.76
VPS33A-203ENST00000536212 HIVEP3Q5T1R4 2406 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 TEX49A0A1B0GTD5 131 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 COX7A2LO14548 114 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 KRTAP10-9P60411 292 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 C9orf153Q5TBE3 101 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 C1orf195Q5TG92 126 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 LINC00336Q6ZUF6 198 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 C3orf22Q8N5N4 141 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 CLEC2BQ92478 149 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 Q9H8V8 135 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 XCL2Q9UBD3 114 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 CFAP47Q6ZTR5 3102 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 DMXL1Q9Y485 3027 aa4.05□□□□□ -1.76
VPS33A-203ENST00000536212 ADGRG4Q8IZF6 3080 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 PLAC8L1A1L4L8 177 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 CCL24O00175 119 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 TRACP01848 142 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 GIG44P09565 113 aaPredicted RBP4.04□□□□□ -1.76
VPS33A-203ENST00000536212 NPC2P61916 151 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 FAM222AQ5U5X8 452 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 Q6ZTI0 123 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 TMEM243Q9BU79 118 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 COL6A6A6NMZ7 2263 aa4.04□□□□□ -1.76
VPS33A-203ENST00000536212 SPTBN2O15020 2390 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 NACAE9PAV3 2078 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 TRBV6-4A0A1B0GX49 114 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 DAND5Q8N907 189 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 C16orf74Q96GX8 76 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 C16orf95Q9H693 158 aa4.03□□□□□ -1.76
VPS33A-203ENST00000536212 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
VPS33A-203ENST00000536212 PIEZO2Q9H5I5 2752 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 TRBV7-7A0A0K0K1E9 115 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 DNAJC9-AS1A6NH13 148 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 NDUFC2-KCTD14E9PQ53 114 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 ACYP1P07311 99 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 CRYGAP11844 174 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
VPS33A-203ENST00000536212 CD164Q04900 197 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 SDIM1Q6ZPB5 146 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 PRIMA1Q86XR5 153 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 CSNK1G2-AS1Q8NCQ2 148 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 DOPEY2Q9Y3R5 2298 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 HRNRQ86YZ3 2850 aaPredicted RBP4.02□□□□□ -1.77
VPS33A-203ENST00000536212 BOD1L1Q8NFC6 3051 aa4.02□□□□□ -1.77
VPS33A-203ENST00000536212 PRRC2AP48634 2157 aaKnown RBP4.02□□□□□ -1.77
VPS33A-203ENST00000536212 DMXL2Q8TDJ6 3036 aa4.01□□□□□ -1.77
VPS33A-203ENST00000536212 SPTBN1Q01082 2364 aaKnown RBP4.01□□□□□ -1.77
VPS33A-203ENST00000536212 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
VPS33A-203ENST00000536212 Q75L30 129 aa4.01□□□□□ -1.77
VPS33A-203ENST00000536212 NOP10Q9NPE3 64 aaKnown RBP4.01□□□□□ -1.77
VPS33A-203ENST00000536212 C22orf24Q9Y442 160 aa4.01□□□□□ -1.77
VPS33A-203ENST00000536212 PRRC2CQ9Y520 2896 aaKnown RBP4.01□□□□□ -1.77
VPS33A-203ENST00000536212 CR1P17927 2039 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 SPTA1P02549 2419 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 IGHV3OR16-9A0A0B4J2B5 98 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 LOC100131303A0A0U1RQF7 123 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 UBE2L6O14933 153 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 IGLV1-51P01701 117 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 PRB1P04280 392 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 RPL35AP18077 110 aaKnown RBP4□□□□□ -1.77
VPS33A-203ENST00000536212 C4orf26Q17RF5 130 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 ZNF843Q8N446 348 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 LINC00612Q8N6U2 182 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 COX7B2Q8TF08 81 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 ESM1Q9NQ30 184 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 ATMQ13315 3056 aa4□□□□□ -1.77
VPS33A-203ENST00000536212 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.99□□□□□ -1.774e-9■■■■■ 34.1
VPS33A-203ENST00000536212 DCHS1Q96JQ0 3298 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 A0A087WZ39 114 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 TRBV6-8A0A0A6YYG3 113 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 IBA57-AS1B1ANH7 110 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
VPS33A-203ENST00000536212 LINC00643Q86TS7 51 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 LINC01561Q8N1V8 128 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 FAM218AQ96MZ4 157 aa3.99□□□□□ -1.77
VPS33A-203ENST00000536212 ASPMQ8IZT6 3477 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 ATRXP46100 2492 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 AKAP6Q13023 2319 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 TRGV2A0A075B6R0 118 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 TRGV4A0A0C4DH28 118 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 LOC107984640A0A0U1RRK4 108 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 CRPP02741 224 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 COX7CP15954 63 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 LINC00337Q8N6G1 96 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 LINC01006Q8NI28 216 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 DPH3Q96FX2 82 aa3.98□□□□□ -1.77
VPS33A-203ENST00000536212 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms