RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 BRI3O95415 125 aa9.28□□□□□ -0.92
SPG11-203ENST00000535302 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
SPG11-203ENST00000535302 V9GYY9 64 aa9.28□□□□□ -0.92
SPG11-203ENST00000535302 CCDC179H3BU77 68 aa9.28□□□□□ -0.92
SPG11-203ENST00000535302 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
SPG11-203ENST00000535302 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
SPG11-203ENST00000535302 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
SPG11-203ENST00000535302 UQCRQO14949 82 aa9.27□□□□□ -0.92
SPG11-203ENST00000535302 MIFP14174 115 aa9.27□□□□□ -0.92
SPG11-203ENST00000535302 KRTAP10-9P60411 292 aa9.27□□□□□ -0.92
SPG11-203ENST00000535302 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.92
SPG11-203ENST00000535302 ODF3Q96PU9 254 aa9.27□□□□□ -0.92
SPG11-203ENST00000535302 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.93
SPG11-203ENST00000535302 SMIM9A6NGZ8 99 aa9.27□□□□□ -0.93
SPG11-203ENST00000535302 RBX1P62877 108 aa9.27□□□□□ -0.93
SPG11-203ENST00000535302 TRAV10A0A0B4J240 114 aa9.26□□□□□ -0.93
SPG11-203ENST00000535302 AVPP01185 164 aa9.26□□□□□ -0.93
SPG11-203ENST00000535302 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
SPG11-203ENST00000535302 BEAN1Q3B7T3 259 aa9.25□□□□□ -0.93
SPG11-203ENST00000535302 PRYO14603 147 aa9.25□□□□□ -0.93
SPG11-203ENST00000535302 PTPN13Q12923 2485 aa9.25□□□□□ -0.93
SPG11-203ENST00000535302 BDP1A6H8Y1 2624 aa9.25□□□□□ -0.93
SPG11-203ENST00000535302 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
SPG11-203ENST00000535302 TSHBP01222 138 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 IBA57-AS1B1ANH7 110 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 AGRNO00468 2067 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 EBI3Q14213 229 aa9.24□□□□□ -0.93
SPG11-203ENST00000535302 C10orf25Q5T742 122 aa9.23□□□□□ -0.93
SPG11-203ENST00000535302 PRO3102Q9H379 93 aa9.23□□□□□ -0.93
SPG11-203ENST00000535302 PSPHP1O15172 72 aa9.23□□□□□ -0.93
SPG11-203ENST00000535302 LINC00959A0A1B0GUT2 108 aa9.23□□□□□ -0.93
SPG11-203ENST00000535302 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
SPG11-203ENST00000535302 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 SBSPONQ8IVN8 264 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 M0QXV9 152 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 LINC00694P0DN24 101 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 Q9UF83 564 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
SPG11-203ENST00000535302 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.93
SPG11-203ENST00000535302 LINC00208Q96KT6 92 aa9.21□□□□□ -0.93
SPG11-203ENST00000535302 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.93
SPG11-203ENST00000535302 M0R378 163 aa9.21□□□□□ -0.93
SPG11-203ENST00000535302 H7C423 109 aa9.21□□□□□ -0.94
SPG11-203ENST00000535302 NUPR2A6NF83 97 aa9.21□□□□□ -0.94
SPG11-203ENST00000535302 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
SPG11-203ENST00000535302 SONP18583 2426 aaKnown RBP9.2□□□□□ -0.94
SPG11-203ENST00000535302 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
SPG11-203ENST00000535302 Q8N6K4 173 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 NRACQ8N912 160 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
SPG11-203ENST00000535302 U3KQK5 164 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 CYSRT1A8MQ03 144 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 C1orf195Q5TG92 126 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 UNQ6190/PRO20217Q6UXQ8 127 aa9.19□□□□□ -0.94
SPG11-203ENST00000535302 LINC01547P58512 204 aaPredicted RBP9.18□□□□□ -0.94
SPG11-203ENST00000535302 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
SPG11-203ENST00000535302 COX6A2Q02221 97 aa9.18□□□□□ -0.94
SPG11-203ENST00000535302 PMAIP1Q13794 54 aa9.17□□□□□ -0.94
SPG11-203ENST00000535302 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
SPG11-203ENST00000535302 A0A087WVE0 104 aa9.17□□□□□ -0.94
SPG11-203ENST00000535302 A8MTW9 85 aa9.17□□□□□ -0.94
SPG11-203ENST00000535302 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
SPG11-203ENST00000535302 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
SPG11-203ENST00000535302 CRYGAP11844 174 aa9.16□□□□□ -0.94
SPG11-203ENST00000535302 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
SPG11-203ENST00000535302 ZNF73O43830 326 aaPredicted RBP9.16□□□□□ -0.94
SPG11-203ENST00000535302 LELP1Q5T871 98 aa9.15□□□□□ -0.94
SPG11-203ENST00000535302 A0A087WYN8 130 aa9.14□□□□□ -0.95
SPG11-203ENST00000535302 CUL9Q8IWT3 2517 aa9.14□□□□□ -0.95
SPG11-203ENST00000535302 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
SPG11-203ENST00000535302 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
SPG11-203ENST00000535302 KLLNB2CW77 178 aa9.13□□□□□ -0.95
SPG11-203ENST00000535302 PRLHP81277 87 aa9.13□□□□□ -0.95
SPG11-203ENST00000535302 HIVEP3Q5T1R4 2406 aa9.13□□□□□ -0.95
SPG11-203ENST00000535302 FSTL3O95633 263 aa9.12□□□□□ -0.95
SPG11-203ENST00000535302 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
SPG11-203ENST00000535302 ATP5EP2Q5VTU8 51 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 IGLV4-60A0A075B6I1 120 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 XGP55808 180 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 ODF3L2Q3SX64 289 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 C2orf91Q6ZV80 131 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 Q6ZTC4 211 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 YPEL4Q96NS1 127 aa9.1□□□□□ -0.95
SPG11-203ENST00000535302 Q9BRP9 147 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 LST1O00453 97 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 MRGPRG-AS1Q2M3A8 158 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 SERTAD4-AS1Q5TG53 156 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 A0A1W2PPR1 153 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 NAV3Q8IVL0 2385 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 COL5A1P20908 1838 aaPredicted RBP9.09□□□□□ -0.95
SPG11-203ENST00000535302 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
SPG11-203ENST00000535302 ADAMTS20P59510 1910 aa9.08□□□□□ -0.96
SPG11-203ENST00000535302 NOTCH2Q04721 2471 aa9.08□□□□□ -0.96
SPG11-203ENST00000535302 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms