RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GTF2H5Q6ZYL4 71 aa9.32□□□□□ -0.92
BEST1-208ENST00000534553 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 G3V4G9 280 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 H3BUT2 72 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
BEST1-208ENST00000534553 RAB37Q96AX2 223 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 FABP2P12104 132 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
BEST1-208ENST00000534553 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
BEST1-208ENST00000534553 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
BEST1-208ENST00000534553 HERV-K104P63124 156 aa9.3□□□□□ -0.92
BEST1-208ENST00000534553 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
BEST1-208ENST00000534553 RBX1P62877 108 aa9.29□□□□□ -0.92
BEST1-208ENST00000534553 LELP1Q5T871 98 aa9.29□□□□□ -0.92
BEST1-208ENST00000534553 COPS9Q8WXC6 57 aa9.29□□□□□ -0.92
BEST1-208ENST00000534553 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
BEST1-208ENST00000534553 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 K7ERJ3 54 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 SS18Q15532 418 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 NBEAL2Q6ZNJ1 2754 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 STAB1Q9NY15 2570 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 IFITM1P13164 125 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 HTN3P15516 51 aa9.28□□□□□ -0.92
BEST1-208ENST00000534553 A0A087WZ39 114 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 IGLL5B9A064 214 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 MIAQ16674 131 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 LITAFQ99732 161 aa9.27□□□□□ -0.93
BEST1-208ENST00000534553 A0A096LPF7 62 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 K7EP34 96 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 LYRM7Q5U5X0 104 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 SPATA25Q9BR10 227 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 Q9H8V8 135 aa9.26□□□□□ -0.93
BEST1-208ENST00000534553 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
BEST1-208ENST00000534553 RETNQ9HD89 108 aa9.25□□□□□ -0.93
BEST1-208ENST00000534553 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
BEST1-208ENST00000534553 COL6A5A8TX70 2615 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 MUSTN1Q8IVN3 82 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 ZNF625Q96I27 306 aaPredicted RBP9.24□□□□□ -0.93
BEST1-208ENST00000534553 A4D1N5 150 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
BEST1-208ENST00000534553 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
BEST1-208ENST00000534553 APOMO95445 188 aa9.23□□□□□ -0.93
BEST1-208ENST00000534553 PRSS2P07478 247 aa9.23□□□□□ -0.93
BEST1-208ENST00000534553 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
BEST1-208ENST00000534553 CFC1P0CG37 223 aa9.23□□□□□ -0.93
BEST1-208ENST00000534553 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
BEST1-208ENST00000534553 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.93
BEST1-208ENST00000534553 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.93
BEST1-208ENST00000534553 Q6ZTC4 211 aa9.21□□□□□ -0.93
BEST1-208ENST00000534553 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.93
BEST1-208ENST00000534553 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.93
BEST1-208ENST00000534553 A0A0J9YWU9 116 aa9.21□□□□□ -0.94
BEST1-208ENST00000534553 REG3AQ06141 175 aa9.21□□□□□ -0.94
BEST1-208ENST00000534553 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
BEST1-208ENST00000534553 TSPAN13O95857 204 aa9.2□□□□□ -0.94
BEST1-208ENST00000534553 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
BEST1-208ENST00000534553 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
BEST1-208ENST00000534553 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
BEST1-208ENST00000534553 XCL1P47992 114 aa9.19□□□□□ -0.94
BEST1-208ENST00000534553 Q8IZM0 81 aa9.19□□□□□ -0.94
BEST1-208ENST00000534553 PKD1L1Q8TDX9 2849 aa9.19□□□□□ -0.94
BEST1-208ENST00000534553 COX7A2LO14548 114 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 MDFIQ99750 246 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 PRR34Q9NV39 138 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 TOMM7Q9P0U1 55 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
BEST1-208ENST00000534553 DEFB131BA0A096LNP1 70 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 K7EIL1 84 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 CXCL5P42830 114 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 LINC00308Q8TCZ7 52 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
BEST1-208ENST00000534553 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
BEST1-208ENST00000534553 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
BEST1-208ENST00000534553 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
BEST1-208ENST00000534553 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.94
BEST1-208ENST00000534553 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
BEST1-208ENST00000534553 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
BEST1-208ENST00000534553 LOC107984156A0A0G2JMH3 177 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 F8W1H4 67 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 CRPP02741 224 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 MALP21145 153 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 ARL17AQ8IVW1 177 aa9.15□□□□□ -0.95
BEST1-208ENST00000534553 TRBV30A0A0K0K1B3 111 aa9.12□□□□□ -0.95
BEST1-208ENST00000534553 FOXI1Q12951 378 aa9.12□□□□□ -0.95
BEST1-208ENST00000534553 Q1RN00 199 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms