RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MAPKAPK5-AS1Q8N8E1 139 aa12.67□□□□□ -0.38
PHRF1-206ENST00000534320 SERP1Q9Y6X1 66 aa12.67□□□□□ -0.38
PHRF1-206ENST00000534320 USP9YO00507 2555 aaPredicted RBP12.67□□□□□ -0.38
PHRF1-206ENST00000534320 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
PHRF1-206ENST00000534320 CRYGDP07320 174 aa12.66□□□□□ -0.38
PHRF1-206ENST00000534320 LINC00482Q8N8I6 264 aa12.66□□□□□ -0.38
PHRF1-206ENST00000534320 POLR2KP53803 58 aaKnown RBP12.65□□□□□ -0.38
PHRF1-206ENST00000534320 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 CASC2Q6XLA1 102 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 TSHBP01222 138 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 PMAIP1Q13794 54 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 C2orf91Q6ZV80 131 aa12.65□□□□□ -0.38
PHRF1-206ENST00000534320 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 PRM2P04554 102 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 HTTP42858 3142 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 H7C423 109 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
PHRF1-206ENST00000534320 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
PHRF1-206ENST00000534320 ZNF580Q9UK33 172 aa12.63□□□□□ -0.39
PHRF1-206ENST00000534320 LINC00526Q96FQ7 95 aa12.63□□□□□ -0.39
PHRF1-206ENST00000534320 LINC00269Q8N2A0 174 aa12.62□□□□□ -0.39
PHRF1-206ENST00000534320 LST1O00453 97 aa12.61□□□□□ -0.39
PHRF1-206ENST00000534320 UFSP1Q6NVU6 142 aa12.61□□□□□ -0.39
PHRF1-206ENST00000534320 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
PHRF1-206ENST00000534320 RETNQ9HD89 108 aa12.61□□□□□ -0.39
PHRF1-206ENST00000534320 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
PHRF1-206ENST00000534320 Q6JHZ5 121 aa12.6□□□□□ -0.39
PHRF1-206ENST00000534320 SLPIP03973 132 aa12.6□□□□□ -0.39
PHRF1-206ENST00000534320 REG3AQ06141 175 aa12.6□□□□□ -0.39
PHRF1-206ENST00000534320 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
PHRF1-206ENST00000534320 C11orf45Q8TAV5 145 aa12.59□□□□□ -0.39
PHRF1-206ENST00000534320 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
PHRF1-206ENST00000534320 MIFP14174 115 aa12.58□□□□□ -0.39
PHRF1-206ENST00000534320 Q8N976 141 aa12.58□□□□□ -0.4
PHRF1-206ENST00000534320 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
PHRF1-206ENST00000534320 IBA57-AS1B1ANH7 110 aa12.58□□□□□ -0.4
PHRF1-206ENST00000534320 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
PHRF1-206ENST00000534320 SMR3AQ99954 134 aa12.56□□□□□ -0.4
PHRF1-206ENST00000534320 TRAV7A0A075B6U4 112 aa12.55□□□□□ -0.4
PHRF1-206ENST00000534320 CCKP06307 115 aa12.55□□□□□ -0.4
PHRF1-206ENST00000534320 SHISA2Q6UWI4 295 aa12.55□□□□□ -0.4
PHRF1-206ENST00000534320 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
PHRF1-206ENST00000534320 BBC3Q96PG8 261 aaPredicted RBP12.54□□□□□ -0.4
PHRF1-206ENST00000534320 ZNF462Q96JM2 2506 aa12.54□□□□□ -0.4
PHRF1-206ENST00000534320 C5orf42Q9H799 3197 aa12.53□□□□□ -0.4
PHRF1-206ENST00000534320 Q8N9L7 120 aa12.53□□□□□ -0.4
PHRF1-206ENST00000534320 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.4
PHRF1-206ENST00000534320 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.4
PHRF1-206ENST00000534320 CSDC2Q9Y534 153 aaKnown RBP12.52□□□□□ -0.4
PHRF1-206ENST00000534320 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
PHRF1-206ENST00000534320 IGIPA6NJ69 53 aa12.52□□□□□ -0.41
PHRF1-206ENST00000534320 C4orf48Q5BLP8 95 aa12.52□□□□□ -0.41
PHRF1-206ENST00000534320 CHD9Q3L8U1 2897 aa12.52□□□□□ -0.41
PHRF1-206ENST00000534320 PTPRBP23467 1997 aa12.52□□□□□ -0.41
PHRF1-206ENST00000534320 SETD2Q9BYW2 2564 aaPredicted RBP12.52□□□□□ -0.41
PHRF1-206ENST00000534320 A8MZ25 164 aa12.51□□□□□ -0.41
PHRF1-206ENST00000534320 B9D2Q9BPU9 175 aa12.51□□□□□ -0.41
PHRF1-206ENST00000534320 PRR4Q16378 134 aa12.51□□□□□ -0.41
PHRF1-206ENST00000534320 JMJD1CQ15652 2540 aa12.51□□□□□ -0.41
PHRF1-206ENST00000534320 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
PHRF1-206ENST00000534320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.51□□□□□ -0.41
PHRF1-206ENST00000534320 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
PHRF1-206ENST00000534320 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
PHRF1-206ENST00000534320 IGLV1-51P01701 117 aa12.49□□□□□ -0.41
PHRF1-206ENST00000534320 C6orf99Q4VX62 202 aa12.49□□□□□ -0.41
PHRF1-206ENST00000534320 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
PHRF1-206ENST00000534320 UBE2D3P61077 147 aa12.48□□□□□ -0.41
PHRF1-206ENST00000534320 UBE2D2P62837 147 aa12.48□□□□□ -0.41
PHRF1-206ENST00000534320 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
PHRF1-206ENST00000534320 UBE2D1P51668 147 aa12.47□□□□□ -0.41
PHRF1-206ENST00000534320 A0A096LNJ9 63 aa12.47□□□□□ -0.41
PHRF1-206ENST00000534320 PRO0628Q9UI54 55 aa12.46□□□□□ -0.41
PHRF1-206ENST00000534320 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
PHRF1-206ENST00000534320 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
PHRF1-206ENST00000534320 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
PHRF1-206ENST00000534320 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
PHRF1-206ENST00000534320 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
PHRF1-206ENST00000534320 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
PHRF1-206ENST00000534320 Q6ZQY7 126 aa12.42□□□□□ -0.42
PHRF1-206ENST00000534320 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
PHRF1-206ENST00000534320 PKD1L2Q7Z442 2459 aa12.42□□□□□ -0.42
PHRF1-206ENST00000534320 FN1P02751 2386 aaKnown RBP12.42□□□□□ -0.42
PHRF1-206ENST00000534320 LINC00959A0A1B0GUT2 108 aa12.42□□□□□ -0.42
PHRF1-206ENST00000534320 WFDC13Q8IUB5 93 aa12.42□□□□□ -0.42
PHRF1-206ENST00000534320 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
PHRF1-206ENST00000534320 DOPEY1Q5JWR5 2465 aa12.41□□□□□ -0.42
PHRF1-206ENST00000534320 IGLV4-69A0A075B6H9 119 aa12.4□□□□□ -0.42
PHRF1-206ENST00000534320 A0A0J9YWU9 116 aa12.4□□□□□ -0.42
PHRF1-206ENST00000534320 RANBP2P49792 3224 aaKnown RBP12.4□□□□□ -0.42
PHRF1-206ENST00000534320 POLQO75417 2590 aa12.4□□□□□ -0.42
PHRF1-206ENST00000534320 LELP1Q5T871 98 aa12.4□□□□□ -0.43
PHRF1-206ENST00000534320 BPTFQ12830 3046 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 IGHV4-30-4P0DP06 118 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
PHRF1-206ENST00000534320 LRCOL1A6NCL2 159 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms