RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 FHL2Q14192 279 aa10.83□□□□□ -0.68
CACNA1E-208ENST00000533229 TRGV4A0A0C4DH28 118 aa10.82□□□□□ -0.68
CACNA1E-208ENST00000533229 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
CACNA1E-208ENST00000533229 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
CACNA1E-208ENST00000533229 Q9H8V8 135 aa10.82□□□□□ -0.68
CACNA1E-208ENST00000533229 F5H768 121 aa10.81□□□□□ -0.68
CACNA1E-208ENST00000533229 Q1RN00 199 aa10.81□□□□□ -0.68
CACNA1E-208ENST00000533229 UBE2L6O14933 153 aa10.8□□□□□ -0.68
CACNA1E-208ENST00000533229 TIMM17BO60830 172 aa10.8□□□□□ -0.68
CACNA1E-208ENST00000533229 TRIAP1O43715 76 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 CIDEAO60543 219 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 CRLF1O75462 422 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 ANKRD29Q8N6D5 301 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 PPDPFLQ8WWR9 84 aa10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
CACNA1E-208ENST00000533229 MT-ATP8P03928 68 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 GAGE6Q13070 117 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 TRBV30A0A0K0K1B3 111 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 INAFM1C9JVW0 142 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 XGP55808 180 aa10.78□□□□□ -0.68
CACNA1E-208ENST00000533229 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
CACNA1E-208ENST00000533229 TRBV6-8A0A0A6YYG3 113 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 C9JAW5 83 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 RNF183Q96D59 192 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 FLNBO75369 2602 aaKnown RBP10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 IFITM1P13164 125 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 X6R8D5 127 aa10.76□□□□□ -0.69
CACNA1E-208ENST00000533229 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 H7C423 109 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 SLC25A20O43772 301 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 SOSTDC1Q6X4U4 206 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 KIR2DL5BQ8NHK3 375 aa10.75□□□□□ -0.69
CACNA1E-208ENST00000533229 PRIMA1Q86XR5 153 aa10.74□□□□□ -0.69
CACNA1E-208ENST00000533229 CKS1BP61024 79 aa10.73□□□□□ -0.69
CACNA1E-208ENST00000533229 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
CACNA1E-208ENST00000533229 A0A1B0GV72 72 aa10.73□□□□□ -0.69
CACNA1E-208ENST00000533229 ATXN8Q156A1 80 aa10.73□□□□□ -0.69
CACNA1E-208ENST00000533229 NSD1Q96L73 2696 aaPredicted RBP10.73□□□□□ -0.69
CACNA1E-208ENST00000533229 RPL13AP40429 203 aaKnown RBP10.72□□□□□ -0.69
CACNA1E-208ENST00000533229 LINC01620Q4KN68 170 aa10.72□□□□□ -0.69
CACNA1E-208ENST00000533229 TRRAPQ9Y4A5 3859 aa10.72□□□□□ -0.69
CACNA1E-208ENST00000533229 MEIG1Q5JSS6 88 aa10.71□□□□□ -0.69
CACNA1E-208ENST00000533229 GYPEP15421 78 aa10.7□□□□□ -0.7
CACNA1E-208ENST00000533229 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
CACNA1E-208ENST00000533229 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
CACNA1E-208ENST00000533229 M0QXV9 152 aa10.69□□□□□ -0.7
CACNA1E-208ENST00000533229 DEFB4AO15263 64 aa10.69□□□□□ -0.7
CACNA1E-208ENST00000533229 C9orf66Q5T8R8 295 aa10.69□□□□□ -0.7
CACNA1E-208ENST00000533229 A0A096LPF7 62 aa10.68□□□□□ -0.7
CACNA1E-208ENST00000533229 HERV-K104P63124 156 aa10.68□□□□□ -0.7
CACNA1E-208ENST00000533229 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
CACNA1E-208ENST00000533229 DEFB135Q30KP9 77 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 HIVEP1P15822 2718 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 COX6CP09669 75 aa10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
CACNA1E-208ENST00000533229 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
CACNA1E-208ENST00000533229 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
CACNA1E-208ENST00000533229 PRO0255Q9UI72 69 aa10.66□□□□□ -0.7
CACNA1E-208ENST00000533229 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
CACNA1E-208ENST00000533229 LST1O00453 97 aa10.65□□□□□ -0.7
CACNA1E-208ENST00000533229 A0A087WZ39 114 aa10.64□□□□□ -0.71
CACNA1E-208ENST00000533229 TEX49A0A1B0GTD5 131 aa10.64□□□□□ -0.71
CACNA1E-208ENST00000533229 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
CACNA1E-208ENST00000533229 TRAV26-1A0A087WT03 109 aa10.63□□□□□ -0.71
CACNA1E-208ENST00000533229 SHISA2Q6UWI4 295 aa10.63□□□□□ -0.71
CACNA1E-208ENST00000533229 MIR7-3HGQ8N6C7 128 aa10.63□□□□□ -0.71
CACNA1E-208ENST00000533229 CITED1Q99966 193 aa10.63□□□□□ -0.71
CACNA1E-208ENST00000533229 ATRQ13535 2644 aa10.63□□□□□ -0.71
CACNA1E-208ENST00000533229 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
CACNA1E-208ENST00000533229 C2orf82Q6UX34 121 aa10.62□□□□□ -0.71
CACNA1E-208ENST00000533229 COPS9Q8WXC6 57 aa10.62□□□□□ -0.71
CACNA1E-208ENST00000533229 IGHV4-28A0A0C4DH34 117 aa10.61□□□□□ -0.71
CACNA1E-208ENST00000533229 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
CACNA1E-208ENST00000533229 PAX4O43316 350 aa10.61□□□□□ -0.71
CACNA1E-208ENST00000533229 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
CACNA1E-208ENST00000533229 XCL1P47992 114 aa10.61□□□□□ -0.71
CACNA1E-208ENST00000533229 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
CACNA1E-208ENST00000533229 Q8N3U1 123 aa10.6□□□□□ -0.71
CACNA1E-208ENST00000533229 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
CACNA1E-208ENST00000533229 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
CACNA1E-208ENST00000533229 PPDPFQ9H3Y8 114 aa10.59□□□□□ -0.71
CACNA1E-208ENST00000533229 COX7A2LO14548 114 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 APOC4P55056 127 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 LINC00158P58513 81 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 MAST4O15021 2626 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms