RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CBY1Q9Y3M2 126 aa3.93□□□□□ -1.78
PCF11-205ENST00000530906 CSMD2Q7Z408 3487 aa3.93□□□□□ -1.78
PCF11-205ENST00000530906 TRAV26-1A0A087WT03 109 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 TRBV6-8A0A0A6YYG3 113 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 GAGE12JA6NER3 117 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 J3QR89 54 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 MIFP14174 115 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 GAGE4Q13068 117 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 GAGE5Q13069 117 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 MIAQ16674 131 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 OCIAD2Q56VL3 154 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 WFDC10AQ9H1F0 79 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 Q9UF83 564 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 PRO0255Q9UI72 69 aa3.92□□□□□ -1.78
PCF11-205ENST00000530906 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 K7ERJ3 54 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 M0QXV9 152 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 HIST2H2BDQ6DRA6 164 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 CEMP1Q6PRD7 247 aaPredicted RBP3.91□□□□□ -1.78
PCF11-205ENST00000530906 LINC01561Q8N1V8 128 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 CDKN2A-AS1Q9UH64 79 aa3.91□□□□□ -1.78
PCF11-205ENST00000530906 ZFHX3Q15911 3703 aa3.9□□□□□ -1.78
PCF11-205ENST00000530906 TRAV8-3A0A0A6YYJ7 113 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 A4D1N5 150 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 A8MZ25 164 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 SMIM1B2RUZ4 78 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 TSPAN13O95857 204 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 SPINK8P0C7L1 97 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 CFC1BP0CG36 223 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 CFC1P0CG37 223 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.79
PCF11-205ENST00000530906 ATP6V0E2Q8NHE4 81 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 DEFB104AQ8WTQ1 72 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 LITAFQ99732 161 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 ERG28Q9UKR5 140 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 NSD1Q96L73 2696 aaPredicted RBP3.9□□□□□ -1.79
PCF11-205ENST00000530906 C2CD3Q4AC94 2353 aa3.9□□□□□ -1.79
PCF11-205ENST00000530906 SETXQ7Z333 2677 aaKnown RBP3.89□□□□□ -1.79
PCF11-205ENST00000530906 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
PCF11-205ENST00000530906 TRBV30A0A0K0K1B3 111 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 F5H768 121 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 APOMO95445 188 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 ATP5G1P05496 136 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 COX6CP09669 75 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 DEFB130BP0DP73 79 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 DEFB130AP0DP74 79 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 GYPEP15421 78 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 KRTAP10-11P60412 298 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 RNASE13Q5GAN3 156 aaKnown RBP3.89□□□□□ -1.79
PCF11-205ENST00000530906 MUSTN1Q8IVN3 82 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 ZNF625Q96I27 306 aaPredicted RBP3.89□□□□□ -1.79
PCF11-205ENST00000530906 NAA38Q9BRA0 125 aaKnown RBP3.89□□□□□ -1.79
PCF11-205ENST00000530906 CHCHD5Q9BSY4 110 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 NF1P21359 2839 aa3.89□□□□□ -1.79
PCF11-205ENST00000530906 IGHV3-64A0A075B6Q5 118 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 A0A087WZ39 114 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 TRAV13-1A0A0B4J241 112 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 H3BMG7 143 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 H3BNG1 76 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 PRSS2P07478 247 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 SPART-AS1P0CW21 52 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 DAD1P61803 113 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 RBX1P62877 108 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 FAM222AQ5U5X8 452 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 ARL17AQ8IVW1 177 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 Q8NAQ8 132 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 LINC01600Q96MT4 127 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
PCF11-205ENST00000530906 HECTD1Q9ULT8 2610 aa3.88□□□□□ -1.79
PCF11-205ENST00000530906 NOTCH2Q04721 2471 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 FN1P02751 2386 aaKnown RBP3.87□□□□□ -1.79
PCF11-205ENST00000530906 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 IGHV4-28A0A0C4DH34 117 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 LOC100131303A0A0U1RQF7 123 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 IBA57-AS1B1ANH7 110 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 G3V4G9 280 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 CXCL5P42830 114 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 PSMB2P49721 201 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 COX6A2Q02221 97 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 GAGE6Q13070 117 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 SS18Q15532 418 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 MRPL23Q16540 153 aaKnown RBP3.87□□□□□ -1.79
PCF11-205ENST00000530906 DEFB135Q30KP9 77 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 MUC7Q8TAX7 377 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 Q9H8V8 135 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 PRO0461Q9UI25 63 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
PCF11-205ENST00000530906 JMJD1CQ15652 2540 aa3.87□□□□□ -1.79
PCF11-205ENST00000530906 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 SCGB1C2P0DMR2 95 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 IGHV4-30-4P0DP06 118 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 EGFEM1PQ0D2K5 195 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 Q1RN00 199 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms