RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ODF3Q96PU9 254 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 LINC00527Q9UJ94 153 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 VPREB3Q9UKI3 123 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 PHLDA3Q9Y5J5 127 aa2.68□□□□□ -1.98
USP47-209ENST00000530041 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 IGHV3-49A0A0A0MS15 119 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 TRAV4A0A0B4J268 109 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 G3V318 75 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 H3BT86 120 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 H3BUA1 57 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 GNRH2O43555 120 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 IFITM1P13164 125 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 ZNF22P17026 224 aaPredicted RBP2.67□□□□□ -1.98
USP47-209ENST00000530041 LGALS3P17931 250 aaKnown RBP2.67□□□□□ -1.98
USP47-209ENST00000530041 SYCNQ0VAF6 134 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 SFTA2Q6UW10 78 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 MUSTN1Q8IVN3 82 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 C1orf158Q8N1D5 194 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 C5orf56Q8N8D9 126 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 SPANXDQ9BXN6 97 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 SPANXCQ9NY87 97 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 SS18L2Q9UHA2 77 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 ZDBF2Q9HCK1 2354 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 SZT2Q5T011 3432 aa2.67□□□□□ -1.98
USP47-209ENST00000530041 TRAV41A0A0B4J266 112 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 TRBV7-7A0A0K0K1E9 115 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 H3BMM0 161 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 M0QY20 66 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 TIMM17BO60830 172 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 SNCGO76070 127 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 RPL39P62891 51 aaKnown RBP2.66□□□□□ -1.98
USP47-209ENST00000530041 MRPS36P82909 103 aaKnown RBP2.66□□□□□ -1.98
USP47-209ENST00000530041 TMEM170BQ5T4T1 132 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 C15orf53Q8NAA6 179 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 LINC01560Q8TB33 94 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 CIRBP-AS1Q8TBR5 109 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 UBE2WQ96B02 151 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 MUC4Q99102 2169 aa2.66□□□□□ -1.98
USP47-209ENST00000530041 CUL9Q8IWT3 2517 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 PKDREJQ9NTG1 2253 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 SPTBN5Q9NRC6 3674 aaKnown RBP2.65□□□□□ -1.99
USP47-209ENST00000530041 IGKV2-28A0A075B6P5 120 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 TRAV2A0A0B4J234 112 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 LST1O00453 97 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 NPFFO15130 113 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 LY6HO94772 140 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 IGKV2D-28P01615 120 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 EMP1P54849 157 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 C2orf82Q6UX34 121 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 UNQ9165/PRO28630Q6UXU0 137 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 USMG5Q96IX5 58 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 CHCHD7Q9BUK0 85 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 IMUPQ9GZP8 106 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 PKIGQ9Y2B9 76 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 ICOSQ9Y6W8 199 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 RANBP2P49792 3224 aaKnown RBP2.65□□□□□ -1.99
USP47-209ENST00000530041 ROS1P08922 2347 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 ARHGAP32A7KAX9 2087 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 XIRP2A4UGR9 3374 aa2.65□□□□□ -1.99
USP47-209ENST00000530041 IGHV1-58A0A0C4DH39 117 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 A8MTW9 85 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 I3L3M4 83 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 IGHG2P01859 326 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 ACYP1P07311 99 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 COX6CP09669 75 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 IGHV3-30-3P0DP02 117 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 DEFB1P60022 68 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 HERVK_113P63121 156 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 MIAQ16674 131 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 DEFB123Q8N688 67 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 RHPN1-AS1Q9BWJ2 59 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 TMEM126AQ9H061 195 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 LAMA1P25391 3075 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
USP47-209ENST00000530041 CD28P10747 220 aa2.63□□□□□ -1.99
USP47-209ENST00000530041 DCANP1Q8TF63 244 aa2.63□□□□□ -1.99
USP47-209ENST00000530041 TIMM21Q9BVV7 248 aa2.63□□□□□ -1.99
USP47-209ENST00000530041 NDUFA12Q9UI09 145 aa2.63□□□□□ -1.99
USP47-209ENST00000530041 WNK2Q9Y3S1 2297 aa2.63□□□□□ -1.99
USP47-209ENST00000530041 POLEQ07864 2286 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 TRAV12-3A0A0B4J271 114 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 H7C2G1 150 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 NDUFA1O15239 70 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 ZNF56Q15929 161 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 MEIG1Q5JSS6 88 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 C5orf38Q86SI9 138 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
USP47-209ENST00000530041 DAZ1Q9NQZ3 744 aaKnown RBP2.62□□□□□ -1.99
USP47-209ENST00000530041 APC2O95996 2303 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 IGHV3-64A0A075B6Q5 118 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 COX7A2LO14548 114 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 TRACP01848 142 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 LINC00313P59037 77 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 DEFB116Q30KQ4 102 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms