RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
TTC39A-216ENST00000530004 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
TTC39A-216ENST00000530004 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
TTC39A-216ENST00000530004 H3BRM9 83 aa9.81□□□□□ -0.84
TTC39A-216ENST00000530004 LEPROTO15243 131 aa9.81□□□□□ -0.84
TTC39A-216ENST00000530004 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
TTC39A-216ENST00000530004 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
TTC39A-216ENST00000530004 LINC00269Q8N2A0 174 aa9.81□□□□□ -0.84
TTC39A-216ENST00000530004 TRAV8-3A0A0A6YYJ7 113 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 J3QQQ9 107 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 CCL18P55774 89 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 SIVA1O15304 175 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
TTC39A-216ENST00000530004 LGALS3P17931 250 aaKnown RBP9.79□□□□□ -0.84
TTC39A-216ENST00000530004 PLEKHB2Q96CS7 222 aa9.79□□□□□ -0.84
TTC39A-216ENST00000530004 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
TTC39A-216ENST00000530004 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 REG3AQ06141 175 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 SS18Q15532 418 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
TTC39A-216ENST00000530004 M0R143 59 aa9.77□□□□□ -0.85
TTC39A-216ENST00000530004 EREGO14944 169 aa9.77□□□□□ -0.85
TTC39A-216ENST00000530004 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
TTC39A-216ENST00000530004 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
TTC39A-216ENST00000530004 IGHV3OR16-9A0A0B4J2B5 98 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 CCL25O15444 150 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 XCL1P47992 114 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 UBE2DNLQ8IWF7 75 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
TTC39A-216ENST00000530004 HINT1P49773 126 aaPredicted RBP9.75□□□□□ -0.85
TTC39A-216ENST00000530004 BATFQ16520 125 aa9.75□□□□□ -0.85
TTC39A-216ENST00000530004 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
TTC39A-216ENST00000530004 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
TTC39A-216ENST00000530004 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
TTC39A-216ENST00000530004 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
TTC39A-216ENST00000530004 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
TTC39A-216ENST00000530004 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
TTC39A-216ENST00000530004 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
TTC39A-216ENST00000530004 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
TTC39A-216ENST00000530004 CHCHD10Q8WYQ3 142 aaPredicted RBP9.73□□□□□ -0.85
TTC39A-216ENST00000530004 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
TTC39A-216ENST00000530004 A0A087WZ39 114 aa9.73□□□□□ -0.85
TTC39A-216ENST00000530004 HSD52Q0P140 79 aa9.73□□□□□ -0.85
TTC39A-216ENST00000530004 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
TTC39A-216ENST00000530004 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
TTC39A-216ENST00000530004 LY6G6CO95867 125 aa9.72□□□□□ -0.85
TTC39A-216ENST00000530004 CRPP02741 224 aa9.72□□□□□ -0.85
TTC39A-216ENST00000530004 LINC01556Q5JQF7 62 aa9.72□□□□□ -0.85
TTC39A-216ENST00000530004 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
TTC39A-216ENST00000530004 UBE2WQ96B02 151 aa9.72□□□□□ -0.85
TTC39A-216ENST00000530004 BVES-AS1Q5T3Y7 98 aa9.71□□□□□ -0.85
TTC39A-216ENST00000530004 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.85
TTC39A-216ENST00000530004 Q9H8V8 135 aa9.71□□□□□ -0.85
TTC39A-216ENST00000530004 DNAH10OSP0CZ25 163 aa9.7□□□□□ -0.86
TTC39A-216ENST00000530004 A0A0J9YXY3 114 aa9.69□□□□□ -0.86
TTC39A-216ENST00000530004 COX7A2LO14548 114 aa9.69□□□□□ -0.86
TTC39A-216ENST00000530004 NDUFA1O15239 70 aa9.69□□□□□ -0.86
TTC39A-216ENST00000530004 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
TTC39A-216ENST00000530004 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 FOXI1Q12951 378 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 GCSHP23434 173 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 TAL2Q16559 108 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 MIAQ16674 131 aa9.68□□□□□ -0.86
TTC39A-216ENST00000530004 LBHQ53QV2 105 aaPredicted RBP9.68□□□□□ -0.86
TTC39A-216ENST00000530004 LCE6AA0A183 80 aa9.67□□□□□ -0.86
TTC39A-216ENST00000530004 CEND1Q8N111 149 aa9.67□□□□□ -0.86
TTC39A-216ENST00000530004 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
TTC39A-216ENST00000530004 LYSTQ99698 3801 aa9.67□□□□□ -0.86
TTC39A-216ENST00000530004 MALP21145 153 aa9.66□□□□□ -0.86
TTC39A-216ENST00000530004 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
TTC39A-216ENST00000530004 COL5A1-AS1Q5SY13 56 aa9.65□□□□□ -0.86
TTC39A-216ENST00000530004 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
TTC39A-216ENST00000530004 SPANXB1Q9NS25 103 aaPredicted RBP9.65□□□□□ -0.86
TTC39A-216ENST00000530004 TMEM238C9JI98 176 aa9.65□□□□□ -0.87
TTC39A-216ENST00000530004 FXYD2P54710 66 aa9.65□□□□□ -0.87
TTC39A-216ENST00000530004 TM2D2Q9BX73 214 aa9.65□□□□□ -0.87
TTC39A-216ENST00000530004 NBDYA0A0U1RRE5 68 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 K7EP13 123 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 PRSS2P07478 247 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 LITAFQ99732 161 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 HERV-K104P63124 156 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 C6orf226Q5I0X4 101 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 Q8IZM0 81 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
TTC39A-216ENST00000530004 APOMO95445 188 aa9.62□□□□□ -0.87
TTC39A-216ENST00000530004 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
TTC39A-216ENST00000530004 KRTAP26-1Q6PEX3 210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms