RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 DPH3Q96FX2 82 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 KCNS1Q96KK3 526 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 C9orf85Q96MD7 179 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 KIF25-AS1Q9Y6Z4 181 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 FAM231BA6NCW3 169 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 RNASE3P12724 160 aaKnown RBP2.23□□□□□ -2.05
PTPRC-213ENST00000529828 MPV17L2Q567V2 206 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 FAM74A4Q5TZK3 123 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 AMMECR1LQ6DCA0 310 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 Q6Q795 121 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 C9orf163Q8N9P6 203 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 OR5C1Q8NGR4 320 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 LINC00479Q96M42 142 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 OTORQ9NRC9 128 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 A0A087WYN8 130 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 NDUFC2O95298 119 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 ANGP03950 147 aaKnown RBP2.23□□□□□ -2.05
PTPRC-213ENST00000529828 TRGC1P0CF51 173 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 MEIG1Q5JSS6 88 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 LINC01600Q96MT4 127 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 KIR2DL4Q99706 377 aa2.23□□□□□ -2.05
PTPRC-213ENST00000529828 IGLV10-54A0A075B6I4 117 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 MUC21A0A0G2JKD1 596 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 A8MWV9 139 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 H3BVH4 76 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 TAX1BP3O14907 124 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 S100A4P26447 101 aaKnown RBP2.22□□□□□ -2.05
PTPRC-213ENST00000529828 Q0VG73 95 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 ELOBQ15370 118 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 LRRC37A5PQ49AS3 106 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 ZFP2Q6ZN57 461 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 Q6ZN92 141 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 PRNTQ86SH4 94 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 GTSF1Q8WW33 167 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 AP1S3Q96PC3 154 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 RNASE7Q9H1E1 156 aaKnown RBP2.22□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM242Q9NWH2 141 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 IGKV3D-20A0A0C4DH25 116 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 A0A0J9YXV3 536 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 hDV102S1A0JD36 115 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 K7EP34 96 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 RHODO00212 210 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 IGLC3P0DOY3 106 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 NDUFV3P56181 108 aaKnown RBP2.22□□□□□ -2.05
PTPRC-213ENST00000529828 PRR3P79522 188 aaKnown RBP2.22□□□□□ -2.05
PTPRC-213ENST00000529828 PMAIP1Q13794 54 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 ADIRFQ15847 76 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 SCGB1C1Q8TD33 95 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 PKIGQ9Y2B9 76 aa2.22□□□□□ -2.05
PTPRC-213ENST00000529828 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV24-1A0A075B6N3 115 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 TMSB15BA0A087X1C1 80 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 IGKV2-24A0A0C4DH68 120 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 FAM236DA0A1B0GTK5 79 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 F8W1H4 67 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 M0R381 172 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 VCYO14598 125 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 NCR2O95944 276 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 SLPIP03973 132 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 TRGC2P03986 189 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 OR5AL1P0C617 328 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 IGLC6P0CF74 106 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 FAM236CP0DP71 79 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 IFITM1P13164 125 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 CTRLP40313 264 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 TAS2R45P59539 299 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 KRTAP10-8P60410 259 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 UBE2D3P61077 147 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 UBE2D2P62837 147 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 CIRBPQ14011 172 aaKnown RBP2.21□□□□□ -2.06
PTPRC-213ENST00000529828 LINC00269Q8N2A0 174 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 C7orf33Q8WU49 177 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 PPP1R1CQ8WVI7 109 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 CHCHD5Q9BSY4 110 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 CHCHD7Q9BUK0 85 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 MANBALQ9NQG1 85 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 LAMTOR3Q9UHA4 124 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
PTPRC-213ENST00000529828 IGHV3-64A0A075B6Q5 118 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 TRAV9-1A0A075B6T8 112 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 A0A0U1RQV1 116 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 H0YIZ8 118 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 CCDC179H3BU77 68 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 DPM2O94777 84 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 TCRAP04437 139 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 SEC11AP67812 179 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 RPL36AP83881 106 aaKnown RBP2.2□□□□□ -2.06
PTPRC-213ENST00000529828 PNRC1Q12796 327 aaPredicted RBP2.2□□□□□ -2.06
PTPRC-213ENST00000529828 MIAQ16674 131 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 KRTAP26-1Q6PEX3 210 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 PQLC2Q6ZP29 291 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 Q6ZUT4 128 aa2.2□□□□□ -2.06
PTPRC-213ENST00000529828 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
PTPRC-213ENST00000529828 RPL36ALQ969Q0 106 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms