RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 HSD52Q0P140 79 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 MSRB1Q9NZV6 116 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 IBA57-AS1B1ANH7 110 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 NFE4Q86UQ8 179 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 BOD1L2Q8IYS8 172 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 C10orf126Q8N4M7 172 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
SSBP3-212ENST00000528930 URB1-AS1Q96HZ7 61 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
SSBP3-212ENST00000528930 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.5
SSBP3-212ENST00000528930 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 TRBV10-1A0A0K0K1A3 114 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 IGHV3-30P01768 117 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 IGHV3-33P01772 117 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 IGHV3-30-3P0DP02 117 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 IGHV3-30-5P0DP03 117 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 UBE2D3P61077 147 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 UBE2D2P62837 147 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 HAMPP81172 84 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 MAJINQ3KP22 176 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 SPANXN1Q5VSR9 72 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 RNASEKQ6P5S7 137 aaKnown RBP5.64□□□□□ -1.51
SSBP3-212ENST00000528930 C2orf91Q6ZV80 131 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 ERASQ7Z444 233 aa5.64□□□□□ -1.51
SSBP3-212ENST00000528930 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 A0A087WTM6 91 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 F8W1H4 67 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 P01737 135 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 FGF6P10767 208 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 FUSP35637 526 aaKnown RBP eCLIP5.63□□□□□ -1.51
SSBP3-212ENST00000528930 Q6ZVH6 145 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 RPP21Q9H633 154 aaKnown RBP5.63□□□□□ -1.51
SSBP3-212ENST00000528930 SPANXA1Q9NS26 97 aa5.63□□□□□ -1.51
SSBP3-212ENST00000528930 A0A1W2PPM0 123 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 HIGD1CA8MV81 97 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 FABP2P12104 132 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
SSBP3-212ENST00000528930 ZNF56Q15929 161 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 TAL2Q16559 108 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 LYZL1Q6UWQ5 148 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 DAZ4Q86SG3 579 aaKnown RBP5.62□□□□□ -1.51
SSBP3-212ENST00000528930 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
SSBP3-212ENST00000528930 VCX2Q9H322 139 aa5.62□□□□□ -1.51
SSBP3-212ENST00000528930 DAZ3Q9NR90 486 aaKnown RBP5.62□□□□□ -1.51
SSBP3-212ENST00000528930 LRCOL1A6NCL2 159 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 F5H697 171 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 CACNG7P62955 275 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 RIGQ13278 110 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 LAGE3Q14657 143 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 ATOH7Q8N100 152 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 TPPP3Q9BW30 176 aa5.61□□□□□ -1.51
SSBP3-212ENST00000528930 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 M0QY20 66 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 SMIM13P0DJ93 91 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 CNFNQ9BYD5 112 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 Q9HAA7 133 aa5.6□□□□□ -1.51
SSBP3-212ENST00000528930 TRBV6-8A0A0A6YYG3 113 aa5.59□□□□□ -1.51
SSBP3-212ENST00000528930 hDV102S1A0JD36 115 aa5.59□□□□□ -1.51
SSBP3-212ENST00000528930 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-212ENST00000528930 NTM-AS1Q6ZSK4 140 aa5.59□□□□□ -1.51
SSBP3-212ENST00000528930 DNAJC30Q96LL9 226 aa5.59□□□□□ -1.51
SSBP3-212ENST00000528930 SPCS1Q9Y6A9 102 aa5.59□□□□□ -1.51
SSBP3-212ENST00000528930 TRAV8-3A0A0A6YYJ7 113 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 A0A1B0GUT8 65 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 PSCAO43653 123 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 MGPP08493 103 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 SUMO4Q6EEV6 95 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
SSBP3-212ENST00000528930 A0A087WX48 190 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 E9PLD3 99 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 H3BUT2 72 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 H7C1H1 209 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 CAMPP49913 170 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 WFDC2Q14508 124 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 TWIST1Q15672 202 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 Q8N814 137 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 MRAP2Q96G30 205 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 KLK12Q9UKR0 248 aa5.57□□□□□ -1.52
SSBP3-212ENST00000528930 ENHOQ6UWT2 76 aa5.56□□□□□ -1.52
SSBP3-212ENST00000528930 A0A1B0GWB2 263 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 TMEM262E9PQX1 116 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 HBDP02042 147 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 LINC00173Q6ZV60 143 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 NTN5Q8WTR8 489 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-212ENST00000528930 UBE2WQ96B02 151 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 PGLYRP4Q96LB8 373 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms