RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 OXLD1Q5BKU9 147 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 ACACBO00763 2458 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 IGLV4-60A0A075B6I1 120 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 TRBV7-7A0A0K0K1E9 115 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 IBA57-AS1B1ANH7 110 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 NDUFV3P56181 108 aaKnown RBP5.86□□□□□ -1.47
CSTF3-208ENST00000528865 SDIM1Q6ZPB5 146 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 WFDC10AQ9H1F0 79 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 VPS13CQ709C8 3753 aa5.86□□□□□ -1.47
CSTF3-208ENST00000528865 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
CSTF3-208ENST00000528865 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 A0A1B0GUV1 79 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 HILS1P60008 231 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 TTC32Q5I0X7 151 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 MIR7-3HGQ8N6C7 128 aa5.85□□□□□ -1.47
CSTF3-208ENST00000528865 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
CSTF3-208ENST00000528865 LINC00959A0A1B0GUT2 108 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 SMIM9A6NGZ8 99 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 H0YGX0 51 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 PLA2G2AP14555 144 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 CCL18P55774 89 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 LINC00337Q8N6G1 96 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 FAM218AQ96MZ4 157 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 SND1-IT1Q9HBX3 110 aa5.84□□□□□ -1.47
CSTF3-208ENST00000528865 ANKRD17O75179 2603 aaKnown RBP5.84□□□□□ -1.47
CSTF3-208ENST00000528865 ITPR1Q14643 2758 aa5.84□□□□□ -1.48
CSTF3-208ENST00000528865 PTPN13Q12923 2485 aa5.83□□□□□ -1.48
CSTF3-208ENST00000528865 CRPP02741 224 aa5.83□□□□□ -1.48
CSTF3-208ENST00000528865 CHCHD5Q9BSY4 110 aa5.83□□□□□ -1.48
CSTF3-208ENST00000528865 INAFM2P0DMQ5 153 aa5.82□□□□□ -1.48
CSTF3-208ENST00000528865 MALP21145 153 aa5.82□□□□□ -1.48
CSTF3-208ENST00000528865 LINC00158P58513 81 aa5.82□□□□□ -1.48
CSTF3-208ENST00000528865 LINC00643Q86TS7 51 aa5.82□□□□□ -1.48
CSTF3-208ENST00000528865 NAV2Q8IVL1 2488 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 LY6G6DO95868 133 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 KRTAP10-3P60369 221 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 C5orf38Q86SI9 138 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 Q8IZM0 81 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 LINC00482Q8N8I6 264 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 SMIM11BQ8TCY0 68 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 OBSCN-AS1Q96MR7 158 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 TOMM7Q9P0U1 55 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 X6R8D5 127 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 FAM208BQ5VWN6 2430 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 CFAP46Q8IYW2 2715 aa5.81□□□□□ -1.48
CSTF3-208ENST00000528865 IGSF10Q6WRI0 2623 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 FBN2P35556 2912 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 GYPEP15421 78 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 SS18Q15532 418 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 PRO0255Q9UI72 69 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 AKAP9Q99996 3911 aa5.8□□□□□ -1.48
CSTF3-208ENST00000528865 CELSR1Q9NYQ6 3014 aa5.79□□□□□ -1.48
CSTF3-208ENST00000528865 IGKV3OR2-268A0A0C4DH90 116 aa5.79□□□□□ -1.48
CSTF3-208ENST00000528865 C6orf226Q5I0X4 101 aa5.79□□□□□ -1.48
CSTF3-208ENST00000528865 LINC00167Q96N53 147 aa5.79□□□□□ -1.48
CSTF3-208ENST00000528865 POLQO75417 2590 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 ZNF462Q96JM2 2506 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 A0A087WYN8 130 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 A0A1B0GX51 115 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 LYRM9A8MSI8 78 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 NDUFC2O95298 119 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 DEFB130BP0DP73 79 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 DEFB130AP0DP74 79 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 CXCL5P42830 114 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 KIAA0087Q14695 138 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 SMCR5Q8TEV8 140 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 Q9HAA7 133 aa5.78□□□□□ -1.48
CSTF3-208ENST00000528865 COL12A1Q99715 3063 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 IGHV4-28A0A0C4DH34 117 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 PAX4O43316 350 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 PFN2P35080 140 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 COX17Q14061 63 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 CD164L2Q6UWJ8 174 aa5.77□□□□□ -1.49
CSTF3-208ENST00000528865 WNK1Q9H4A3 2382 aa5.76□□□□□ -1.49
CSTF3-208ENST00000528865 FLNCQ14315 2725 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 B5MCH6 92 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 DNAL4O96015 105 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 ATP5G1P05496 136 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 XCL1P47992 114 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 NANOS2P60321 138 aaKnown RBP5.75□□□□□ -1.49
CSTF3-208ENST00000528865 C9orf66Q5T8R8 295 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 MUC7Q8TAX7 377 aa5.75□□□□□ -1.49
CSTF3-208ENST00000528865 KLK5Q9Y337 293 aaPredicted RBP5.75□□□□□ -1.49
CSTF3-208ENST00000528865 NOTCH3Q9UM47 2321 aa5.74□□□□□ -1.49
CSTF3-208ENST00000528865 LECT2O14960 151 aa5.74□□□□□ -1.49
CSTF3-208ENST00000528865 USP24Q9UPU5 2620 aa5.73□□□□□ -1.49
CSTF3-208ENST00000528865 C9orf129Q5T035 196 aaKnown RBP5.73□□□□□ -1.49
CSTF3-208ENST00000528865 GAGE2AQ6NT46 116 aa5.73□□□□□ -1.49
CSTF3-208ENST00000528865 OR13C6PQ8NH95 151 aa5.73□□□□□ -1.49
CSTF3-208ENST00000528865 CHCHD10Q8WYQ3 142 aaPredicted RBP5.73□□□□□ -1.49
CSTF3-208ENST00000528865 MYO18BQ8IUG5 2567 aa5.73□□□□□ -1.49
CSTF3-208ENST00000528865 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
CSTF3-208ENST00000528865 MYO9AB2RTY4 2548 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms