RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 DDX60LQ5H9U9 1706 aaKnown RBP2.83□□□□□ -1.96
NXF1-205ENST00000527497 TRGV2A0A075B6R0 118 aa2.83□□□□□ -1.96
NXF1-205ENST00000527497 SYS1-DBNDD2H3BUS1 97 aa2.83□□□□□ -1.96
NXF1-205ENST00000527497 APOC3P02656 99 aa2.83□□□□□ -1.96
NXF1-205ENST00000527497 SMCO4Q9NRQ5 59 aa2.83□□□□□ -1.96
NXF1-205ENST00000527497 ZFHX4Q86UP3 3567 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 IGHV3-30P01768 117 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 IGHV3-30-5P0DP03 117 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 UBE2D1P51668 147 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 C10orf128Q5T292 105 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 FAM167A-AS1Q96KT0 104 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 NXT2Q9NPJ8 142 aaKnown RBP2.82□□□□□ -1.96
NXF1-205ENST00000527497 MANBALQ9NQG1 85 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 FN1P02751 2386 aaKnown RBP2.82□□□□□ -1.96
NXF1-205ENST00000527497 CFAP47Q6ZTR5 3102 aa2.82□□□□□ -1.96
NXF1-205ENST00000527497 TPRP12270 2363 aaKnown RBP2.81□□□□□ -1.96
NXF1-205ENST00000527497 IGKV3-7A0A075B6H7 116 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 TRBV7-3A0A075B6L6 115 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 IGLV3-32A0A0A0MS00 114 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 JMJD7-PLA2G4BH0Y9G9 81 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 M0R2N4 97 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 INE1O15225 51 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 PPYP01298 95 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 PLXNA1Q9UIW2 1896 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 FRYLO94915 3013 aa2.81□□□□□ -1.96
NXF1-205ENST00000527497 BAZ2BQ9UIF8 2168 aaKnown RBP2.8□□□□□ -1.96
NXF1-205ENST00000527497 MYO18AQ92614 2054 aaKnown RBP2.8□□□□□ -1.96
NXF1-205ENST00000527497 LOC285556D6RIA3 1793 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 CYP2G1PQ6ZSU1 146 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 TMEM14CQ9P0S9 112 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 PRO1854Q9UHT4 67 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 ZNF292O60281 2723 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 ICE1Q9Y2F5 2266 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 MYH4Q9Y623 1939 aa2.8□□□□□ -1.96
NXF1-205ENST00000527497 DMXL1Q9Y485 3027 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 DCHS1Q96JQ0 3298 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 UBE2D3P61077 147 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 UBE2D2P62837 147 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 DEFA5Q01523 94 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 DNAH14Q0VDD8 3507 aa2.79□□□□□ -1.96
NXF1-205ENST00000527497 KMT2BQ9UMN6 2715 aaPredicted RBP2.79□□□□□ -1.96
NXF1-205ENST00000527497 USP9XQ93008 2570 aaPredicted RBP2.79□□□□□ -1.96
NXF1-205ENST00000527497 MYOFQ9NZM1 2061 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 TEX49A0A1B0GTD5 131 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 A0A1W2PPM0 123 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 PDCD5O14737 125 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 KRTAP10-1P60331 282 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 ETDBQ3ZM63 59 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 AMELYQ99218 206 aa2.78□□□□□ -1.96
NXF1-205ENST00000527497 BPTFQ12830 3046 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 ALPK2Q86TB3 2170 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 CACNA1HO95180 2353 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 LOC110117498A0A087WWA1 95 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 HIGD1CA8MV81 97 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 IGLV3-1P01715 115 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 COX6CP09669 75 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 PDE6GP18545 87 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 LINC00322Q6ZN03 302 aaPredicted RBP2.77□□□□□ -1.97
NXF1-205ENST00000527497 Q8N6K4 173 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 CYSTM1Q9H1C7 97 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 PRO3102Q9H379 93 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 ASH1LQ9NR48 2969 aaKnown RBP2.77□□□□□ -1.97
NXF1-205ENST00000527497 FREM1Q5H8C1 2179 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 DOCK10Q96BY6 2186 aa2.77□□□□□ -1.97
NXF1-205ENST00000527497 SPTBN2O15020 2390 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 EXPH5Q8NEV8 1989 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 PRRC2BQ5JSZ5 2229 aaKnown RBP2.76□□□□□ -1.97
NXF1-205ENST00000527497 ACACBO00763 2458 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 KANTRA0A1W2PQU2 76 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 H7BZZ5 65 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 BCE1O60756 84 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 DNAL4O96015 105 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 IGLC2P0DOY2 106 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 IGLC3P0DOY3 106 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 EDDM3BP56851 147 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 DEFB103AP81534 67 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 NMSQ5H8A3 153 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 VMO1Q7Z5L0 202 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 MYO7AQ13402 2215 aa2.76□□□□□ -1.97
NXF1-205ENST00000527497 ZNF236Q9UL36 1845 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 RIF1Q5UIP0 2472 aaKnown RBP2.75□□□□□ -1.97
NXF1-205ENST00000527497 GCN1Q92616 2671 aaKnown RBP2.75□□□□□ -1.97
NXF1-205ENST00000527497 A0A0G2JND7 137 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 SMIM11AP58511 58 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 ELOF1P60002 83 aaKnown RBP2.75□□□□□ -1.97
NXF1-205ENST00000527497 ZNF56Q15929 161 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 Q5BKY6 102 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 Q5VV11 94 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 WFDC10AQ9H1F0 79 aa2.75□□□□□ -1.97
NXF1-205ENST00000527497 COL4A4P53420 1690 aaPredicted RBP2.75□□□□□ -1.97
NXF1-205ENST00000527497 FAM208BQ5VWN6 2430 aa2.74□□□□□ -1.97
NXF1-205ENST00000527497 A0A0G2JMZ2 1700 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms