RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
CTNND1-216ENST00000527467 CTSZQ9UBR2 303 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 GDF5OSQ5U4N7 250 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 HCG22E2RYF7 251 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 DEFB1P60022 68 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 LINC00482Q8N8I6 264 aa5.35□□□□□ -1.55
CTNND1-216ENST00000527467 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-216ENST00000527467 CD164Q04900 197 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 USF3Q68DE3 2245 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 Q6YL49 198 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 YLPM1P49750 1951 aaKnown RBP5.34□□□□□ -1.55
CTNND1-216ENST00000527467 DSCAML1Q8TD84 2053 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 ACYP2P14621 99 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 ZNF80P51504 273 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-216ENST00000527467 Q8N814 137 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 MAP6D1Q9H9H5 199 aa5.34□□□□□ -1.55
CTNND1-216ENST00000527467 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.56
CTNND1-216ENST00000527467 U3KQK5 164 aa5.34□□□□□ -1.56
CTNND1-216ENST00000527467 IGF2RP11717 2491 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 EML6Q6ZMW3 1958 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 NBASA2RRP1 2371 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 TRBV6-4A0A1B0GX49 114 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 PCNX1Q96RV3 2341 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 M0QY20 66 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 IGLV2-8P01709 118 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 TP53TG3Q9ULZ0 132 aa5.33□□□□□ -1.56
CTNND1-216ENST00000527467 PTPN13Q12923 2485 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 TP53BP1Q12888 1972 aaPredicted RBP5.32□□□□□ -1.56
CTNND1-216ENST00000527467 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 FSTL3O95633 263 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 SMR3AQ99954 134 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 C7orf65Q6ZTY9 151 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 ODF3L1Q8IXM7 274 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 IGLV3-1P01715 115 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 Q6ZS46 218 aa5.32□□□□□ -1.56
CTNND1-216ENST00000527467 RITA1Q96K30 269 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 Q9UF83 564 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 FASNP49327 2511 aaKnown RBP5.31□□□□□ -1.56
CTNND1-216ENST00000527467 DENND4CQ5VZ89 1909 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 Q6ZTC4 211 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 Q8IZM0 81 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 CIRBP-AS1Q8TBR5 109 aa5.31□□□□□ -1.56
CTNND1-216ENST00000527467 BCE1O60756 84 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 A0A087WSZ3 146 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 RSPO1Q2MKA7 263 aaPredicted RBP5.3□□□□□ -1.56
CTNND1-216ENST00000527467 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 C11orf71Q6IPW1 123 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 LINC00959A0A1B0GUT2 108 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
CTNND1-216ENST00000527467 SHANK1Q9Y566 2161 aa5.29□□□□□ -1.56
CTNND1-216ENST00000527467 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
CTNND1-216ENST00000527467 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
CTNND1-216ENST00000527467 SBSPONQ8IVN8 264 aa5.29□□□□□ -1.56
CTNND1-216ENST00000527467 TSHBP01222 138 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 LMO4P61968 165 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 A0A087WYN8 130 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 MSMPQ1L6U9 139 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 PRRC2AP48634 2157 aaKnown RBP5.28□□□□□ -1.56
CTNND1-216ENST00000527467 ABCA2Q9BZC7 2435 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 Q6ZSR3 168 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
CTNND1-216ENST00000527467 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 SPG11Q96JI7 2443 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 Q9BRP9 147 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 DOPEY1Q5JWR5 2465 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 EGFEM1PQ0D2K5 195 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 LELP1Q5T871 98 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 H3BPC8 53 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 K7EQG2 157 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
CTNND1-216ENST00000527467 CYSRT1A8MQ03 144 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 C16orf95Q9H693 158 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 MALRD1Q5VYJ5 2156 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 NAV3Q8IVL0 2385 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 F8WDY8 70 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 EDN2P20800 178 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 KRTAP24-1Q3LI83 254 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 LCA10Q71F78 164 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 SORL1Q92673 2214 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
CTNND1-216ENST00000527467 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
CTNND1-216ENST00000527467 MED13LQ71F56 2210 aa5.25□□□□□ -1.57
CTNND1-216ENST00000527467 IGLV1-47P01700 117 aa5.25□□□□□ -1.57
CTNND1-216ENST00000527467 POLR2KP53803 58 aaKnown RBP5.24□□□□□ -1.57
CTNND1-216ENST00000527467 SPTBN4Q9H254 2564 aa5.24□□□□□ -1.57
CTNND1-216ENST00000527467 NAV2Q8IVL1 2488 aa5.24□□□□□ -1.57
CTNND1-216ENST00000527467 E7EUB6 86 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms