RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 Q9Y3F1 56 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 CACNA1CQ13936 2221 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 TENM1Q9UKZ4 2725 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 PCDH15Q96QU1 1955 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 MEGF8Q7Z7M0 2845 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 CSMD2Q7Z408 3487 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 LOC285095A0A1B0GVY8 99 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 TCRBV3S1A0A5B6 114 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 HMGA1P17096 107 aaKnown RBP2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 ADCYAP1P18509 176 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 PLPP5Q8NEB5 264 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 C10orf105Q8TEF2 133 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 SPTSSAQ969W0 71 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 CNTRLQ7Z7A1 2325 aa2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 NSD1Q96L73 2696 aaPredicted RBP2.01□□□□□ -2.09
CLNS1A-208ENST00000527265 ALPK2Q86TB3 2170 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 PI4KAP42356 2102 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 EXPH5Q8NEV8 1989 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 IGKV2-24A0A0C4DH68 120 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 A0A1W2PRS3 328 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 SNCGO76070 127 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 NDUFB6O95139 128 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 RPL38P63173 70 aaKnown RBP2□□□□□ -2.09
CLNS1A-208ENST00000527265 DEFB103AP81534 67 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 COL5A1-AS1Q5SY13 56 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 TTC9CQ8N5M4 171 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 TVP23CQ96ET8 276 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 VPS13CQ709C8 3753 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 MUC4Q99102 2169 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 KMT2CQ8NEZ4 4911 aaKnown RBP2□□□□□ -2.09
CLNS1A-208ENST00000527265 COL5A1P20908 1838 aaPredicted RBP2□□□□□ -2.09
CLNS1A-208ENST00000527265 PCNX2A6NKB5 2137 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 COL4A2P08572 1712 aa2□□□□□ -2.09
CLNS1A-208ENST00000527265 MXRA5Q9NR99 2828 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 UNC13CQ8NB66 2214 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 MED12Q93074 2177 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 RYR3Q15413 4870 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 FREM3P0C091 2139 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 AKAP9Q99996 3911 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 VWFP04275 2813 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 TRAV14DV4A0A0A6YYC5 116 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 BRS3P32247 399 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 POLR2JP52435 117 aaKnown RBP1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 LYPD1Q8N2G4 141 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 FAIMQ9NVQ4 179 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 NDUFA12Q9UI09 145 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 AP4S1Q9Y587 144 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 SPAG17Q6Q759 2223 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 RTTNQ86VV8 2226 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 DCHS2Q6V1P9 2916 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 ACANP16112 2415 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 RYR1P21817 5038 aa1.99□□□□□ -2.09
CLNS1A-208ENST00000527265 ASCC3Q8N3C0 2202 aaKnown RBP1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 CCL16O15467 120 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 STATHP02808 62 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 GYPBP06028 91 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 PIPP12273 146 aaPredicted RBP1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 MYO7BQ6PIF6 2116 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 LINC00304Q8N9R0 145 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 OR10AG1Q8NH19 301 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 ZNF431Q8TF32 576 aaPredicted RBP1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 DSCR8Q96T75 97 aa1.98□□□□□ -2.09
CLNS1A-208ENST00000527265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 PRRC2CQ9Y520 2896 aaKnown RBP1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 WNK1Q9H4A3 2382 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 TRAV17A0A0B4J275 112 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 TRGV4A0A0C4DH28 118 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 H3BRN7 92 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 RNASE2P10153 161 aaKnown RBP1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 PRB4P10163 310 aaPredicted RBP1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 NPC2P61916 151 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 SPANXN1Q5VSR9 72 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 XAF1Q6GPH4 301 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 Q8N8P6 123 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 S100ZQ8WXG8 99 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 DPY30Q9C005 99 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 TACC2O95359 2948 aa1.97□□□□□ -2.09
CLNS1A-208ENST00000527265 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 CUBNO60494 3623 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 A0A087WXM4 84 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 TRAV2A0A0B4J234 112 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 F8W1H4 67 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 S100A3P33764 101 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 SPINT3P49223 89 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 RHOHQ15669 191 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 S100A7L2Q5SY68 101 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 TSKUQ8WUA8 353 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 C4orf3Q8WVX3 66 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 TMEM141Q96I45 108 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 LINC00052Q96N35 136 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 AQP10Q96PS8 301 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 TTTY12Q9BZ98 90 aa1.96□□□□□ -2.1
CLNS1A-208ENST00000527265 MED13Q9UHV7 2174 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms