RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
CD44-214ENST00000525211 HECTD4Q9Y4D8 3996 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 CCL25O15444 150 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 ZNF25P17030 456 aaPredicted RBP4.26□□□□□ -1.73
CD44-214ENST00000525211 XCL1P47992 114 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 C10orf126Q8N4M7 172 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
CD44-214ENST00000525211 TMEM101Q96IK0 257 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 HERC2O95714 4834 aa4.26□□□□□ -1.73
CD44-214ENST00000525211 A0A087WTM6 91 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 C1orf196B1AJZ1 125 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 K7EMI3 77 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 HBDP02042 147 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 SLPIP03973 132 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 FABP4P15090 132 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 UBE2D1P51668 147 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 RAB5BP61020 215 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
CD44-214ENST00000525211 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 DGAT2L7PQ6IED9 249 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 ERASQ7Z444 233 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 C5orf38Q86SI9 138 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 C15orf56Q8N910 161 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 TIMM17AQ99595 171 aa4.25□□□□□ -1.73
CD44-214ENST00000525211 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
CD44-214ENST00000525211 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 HSBP1O75506 76 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 CRPP02741 224 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 PKIAP61925 76 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 MIAQ16674 131 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 TMEM18Q96B42 140 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
CD44-214ENST00000525211 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 K7EP13 123 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 PRSS1P07477 247 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 HIGD2BQ4VC39 106 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 HIST3H2BBQ8N257 126 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 IFI27L1Q96BM0 104 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 VCX2Q9H322 139 aa4.23□□□□□ -1.73
CD44-214ENST00000525211 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.22□□□□□ -1.73
CD44-214ENST00000525211 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 SS18Q15532 418 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 NFE4Q86UQ8 179 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
CD44-214ENST00000525211 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 H0Y8G0 127 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.21□□□□□ -1.74
CD44-214ENST00000525211 PSCAO43653 123 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 TRIAP1O43715 76 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
CD44-214ENST00000525211 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
CD44-214ENST00000525211 PMVKQ15126 192 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 Q8N814 137 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 TM2D2Q9BX73 214 aa4.21□□□□□ -1.74
CD44-214ENST00000525211 MRPL35Q9NZE8 188 aaKnown RBP4.21□□□□□ -1.74
CD44-214ENST00000525211 HSPG2P98160 4391 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 C5orf52A6NGY3 159 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 ATP5LO75964 103 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 NPSP0C0P6 89 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 C3orf79P0CE67 100 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 IGLC3P0DOY3 106 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 KIAA0087Q14695 138 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 C10orf25Q5T742 122 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 Q6ZN92 141 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 LINC00336Q6ZUF6 198 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 RMI2Q96E14 147 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 HIST1H2BLQ99880 126 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
CD44-214ENST00000525211 IGHV3-64A0A075B6Q5 118 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 A0A087WZ39 114 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 TRAV12-1A0A0B4J245 112 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 TINCRA0A1B0GVN0 87 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 SMIM1B2RUZ4 78 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 PANO1I0J062 215 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 COX7A2LO14548 114 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 HAMPP81172 84 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 CHAC1Q9BUX1 264 aa4.19□□□□□ -1.74
CD44-214ENST00000525211 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
CD44-214ENST00000525211 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms