RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CRLF1O75462 422 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 IGLV1-51P01701 117 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 DEFB121Q5J5C9 76 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 C16orf95Q9H693 158 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 CHD6Q8TD26 2715 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 ZNF469Q96JG9 3925 aaPredicted RBP12.64□□□□□ -0.39
IKBKB-228ENST00000523517 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
IKBKB-228ENST00000523517 EPG5Q9HCE0 2579 aa12.63□□□□□ -0.39
IKBKB-228ENST00000523517 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
IKBKB-228ENST00000523517 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
IKBKB-228ENST00000523517 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
IKBKB-228ENST00000523517 PPDPFQ9H3Y8 114 aa12.62□□□□□ -0.39
IKBKB-228ENST00000523517 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
IKBKB-228ENST00000523517 RNASE1P07998 156 aaKnown RBP12.61□□□□□ -0.39
IKBKB-228ENST00000523517 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
IKBKB-228ENST00000523517 GAGE6Q13070 117 aa12.61□□□□□ -0.39
IKBKB-228ENST00000523517 TRAV26-1A0A087WT03 109 aa12.61□□□□□ -0.39
IKBKB-228ENST00000523517 TLN2Q9Y4G6 2542 aa12.6□□□□□ -0.39
IKBKB-228ENST00000523517 C15orf53Q8NAA6 179 aa12.6□□□□□ -0.39
IKBKB-228ENST00000523517 ANAPC13Q9BS18 74 aa12.6□□□□□ -0.39
IKBKB-228ENST00000523517 KRTAP1-1Q07627 177 aa12.59□□□□□ -0.39
IKBKB-228ENST00000523517 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
IKBKB-228ENST00000523517 APCP25054 2843 aa12.59□□□□□ -0.39
IKBKB-228ENST00000523517 FHL2Q14192 279 aa12.59□□□□□ -0.39
IKBKB-228ENST00000523517 FAM240AA0A1B0GVK7 77 aa12.58□□□□□ -0.4
IKBKB-228ENST00000523517 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
IKBKB-228ENST00000523517 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
IKBKB-228ENST00000523517 ITPR3Q14573 2671 aa12.57□□□□□ -0.4
IKBKB-228ENST00000523517 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
IKBKB-228ENST00000523517 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
IKBKB-228ENST00000523517 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
IKBKB-228ENST00000523517 Q6Q795 121 aa12.57□□□□□ -0.4
IKBKB-228ENST00000523517 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
IKBKB-228ENST00000523517 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
IKBKB-228ENST00000523517 CHCHD5Q9BSY4 110 aa12.56□□□□□ -0.4
IKBKB-228ENST00000523517 TRACP01848 142 aa12.55□□□□□ -0.4
IKBKB-228ENST00000523517 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
IKBKB-228ENST00000523517 TOMM7Q9P0U1 55 aa12.55□□□□□ -0.4
IKBKB-228ENST00000523517 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
IKBKB-228ENST00000523517 IGHV3OR16-9A0A0B4J2B5 98 aa12.54□□□□□ -0.4
IKBKB-228ENST00000523517 PF4P02776 101 aa12.54□□□□□ -0.4
IKBKB-228ENST00000523517 NDUFV3P56181 108 aaKnown RBP12.54□□□□□ -0.4
IKBKB-228ENST00000523517 TTC32Q5I0X7 151 aa12.54□□□□□ -0.4
IKBKB-228ENST00000523517 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
IKBKB-228ENST00000523517 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
IKBKB-228ENST00000523517 FAM218AQ96MZ4 157 aa12.52□□□□□ -0.4
IKBKB-228ENST00000523517 SND1-IT1Q9HBX3 110 aa12.52□□□□□ -0.41
IKBKB-228ENST00000523517 CRPP02741 224 aa12.51□□□□□ -0.41
IKBKB-228ENST00000523517 RPL28P46779 137 aaKnown RBP12.51□□□□□ -0.41
IKBKB-228ENST00000523517 A0A087WZ39 114 aa12.51□□□□□ -0.41
IKBKB-228ENST00000523517 BAALC-AS2P0C853 105 aa12.51□□□□□ -0.41
IKBKB-228ENST00000523517 LINC00158P58513 81 aa12.51□□□□□ -0.41
IKBKB-228ENST00000523517 LINC00337Q8N6G1 96 aa12.51□□□□□ -0.41
IKBKB-228ENST00000523517 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 NF1P21359 2839 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 CUBNO60494 3623 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
IKBKB-228ENST00000523517 C5orf38Q86SI9 138 aa12.49□□□□□ -0.41
IKBKB-228ENST00000523517 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
IKBKB-228ENST00000523517 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
IKBKB-228ENST00000523517 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 ACYP1P07311 99 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 NOTCH3Q9UM47 2321 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 HILS1P60008 231 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 C22orf24Q9Y442 160 aa12.48□□□□□ -0.41
IKBKB-228ENST00000523517 CCL18P55774 89 aa12.47□□□□□ -0.41
IKBKB-228ENST00000523517 CCDC168Q8NDH2 2452 aa12.47□□□□□ -0.41
IKBKB-228ENST00000523517 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
IKBKB-228ENST00000523517 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
IKBKB-228ENST00000523517 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.42
IKBKB-228ENST00000523517 NBPF19A0A087WUL8 3843 aa12.46□□□□□ -0.42
IKBKB-228ENST00000523517 ANK3Q12955 4377 aaKnown RBP12.45□□□□□ -0.42
IKBKB-228ENST00000523517 JMJD1CQ15652 2540 aa12.45□□□□□ -0.42
IKBKB-228ENST00000523517 GYPEP15421 78 aa12.45□□□□□ -0.42
IKBKB-228ENST00000523517 PFN2P35080 140 aa12.44□□□□□ -0.42
IKBKB-228ENST00000523517 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
IKBKB-228ENST00000523517 Q9HAA7 133 aa12.44□□□□□ -0.42
IKBKB-228ENST00000523517 TRBV7-7A0A0K0K1E9 115 aa12.44□□□□□ -0.42
IKBKB-228ENST00000523517 MALP21145 153 aa12.42□□□□□ -0.42
IKBKB-228ENST00000523517 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
IKBKB-228ENST00000523517 KRTAP10-3P60369 221 aa12.42□□□□□ -0.42
IKBKB-228ENST00000523517 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
IKBKB-228ENST00000523517 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 XCL1P47992 114 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 A0A087WYN8 130 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 SS18Q15532 418 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 LINC00482Q8N8I6 264 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 X6R8D5 127 aa12.41□□□□□ -0.42
IKBKB-228ENST00000523517 PAX4O43316 350 aa12.4□□□□□ -0.42
IKBKB-228ENST00000523517 SMCR5Q8TEV8 140 aa12.4□□□□□ -0.42
IKBKB-228ENST00000523517 C11orf68Q9H3H3 251 aaKnown RBP12.4□□□□□ -0.42
IKBKB-228ENST00000523517 H0YGX0 51 aa12.4□□□□□ -0.43
IKBKB-228ENST00000523517 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.43
IKBKB-228ENST00000523517 PRO0255Q9UI72 69 aa12.39□□□□□ -0.43
IKBKB-228ENST00000523517 CCDC179H3BU77 68 aa12.38□□□□□ -0.43
IKBKB-228ENST00000523517 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms