RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 CASC2Q6XLA1 102 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 DEFB124Q8NES8 71 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 SPTSSBQ8NFR3 76 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 PATE1Q8WXA2 126 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 TIMM21Q9BVV7 248 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 KIAA1549Q9HCM3 1950 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 CNTRLQ7Z7A1 2325 aa2.41□□□□□ -2.02
CTNNA1-238ENST00000523298 ZNF292O60281 2723 aa2.4□□□□□ -2.02
CTNNA1-238ENST00000523298 URB1O60287 2271 aaKnown RBP2.4□□□□□ -2.02
CTNNA1-238ENST00000523298 SPTY2D1-AS1A0A0U1RR47 76 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 CXorf51AA0A1B0GTR3 108 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 PRB4P10163 310 aaPredicted RBP2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 AHCTF1Q8WYP5 2266 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 PIEZO1Q92508 2521 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 PRR14LQ5THK1 2151 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 MUC4Q99102 2169 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 LAMA1P25391 3075 aa2.4□□□□□ -2.03
CTNNA1-238ENST00000523298 MAP1BP46821 2468 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 IGLV2-18A0A075B6J9 118 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 H7C2G1 150 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 MGST1P10620 155 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 GCHFRP30047 84 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 Q5VV11 94 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 Q8N6K4 173 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 COX14Q96I36 57 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 C14orf132Q9NPU4 83 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 FAM215AQ9Y5M1 114 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 ZGRF1Q86YA3 2104 aa2.39□□□□□ -2.03
CTNNA1-238ENST00000523298 TPRP12270 2363 aaKnown RBP2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 A0A087WSZ3 146 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 TRAV22A0A0B4J277 110 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 FAM223BA6NKX1 122 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 IQCF6A8MYZ5 107 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 C10orf142B7Z368 130 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 E7EUB6 86 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 H3BPC8 53 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 APC2O95996 2303 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 IL4P05112 153 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 HMGN2P05204 90 aaKnown RBP2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 P0C880 135 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 MIFP14174 115 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 PSMG4Q5JS54 123 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 DYNLRB1Q9NP97 96 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 TIMM9Q9Y5J7 89 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 MPDZO75970 2070 aa2.38□□□□□ -2.03
CTNNA1-238ENST00000523298 DOCK11Q5JSL3 2073 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 TRAV40A0A0B4J280 105 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 MYMXA0A1B0GTQ4 84 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 A6NIN4 97 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 C2orf70A6NJV1 201 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 H3BQ85 93 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 STATHP02808 62 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 BAGE3Q86Y29 109 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 BAGE2Q86Y30 109 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 DEFB107AQ8IZN7 70 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 C20orf197Q8N268 126 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 PROK2Q9HC23 129 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 U3KQA8 63 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 ARL2-SNX15V9GYD0 113 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 CACNA1BQ00975 2339 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 FRYLO94915 3013 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 CPAMD8Q8IZJ3 1885 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 COL6A6A6NMZ7 2263 aa2.37□□□□□ -2.03
CTNNA1-238ENST00000523298 AKAP13Q12802 2813 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 IGF2RP11717 2491 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 BPTFQ12830 3046 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 DMXL1Q9Y485 3027 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 PTPRQQ9UMZ3 2332 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 CFAP54Q96N23 3096 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 DNAJC13O75165 2243 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 IGLV3-32A0A0A0MS00 114 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 TRBV6-7A0A0A0MS04 114 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 SDHAF1A6NFY7 115 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 C11orf86A6NJI1 115 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 F8WEM9 126 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 TFF1P04155 84 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 DEFB110Q30KQ9 67 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 RPS27LQ71UM5 84 aaKnown RBP2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 FAM103A1Q9BTL3 118 aaKnown RBP2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 NCOR2Q9Y618 2525 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 CHD8Q9HCK8 2581 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 MALRD1Q5VYJ5 2156 aa2.36□□□□□ -2.03
CTNNA1-238ENST00000523298 IGHV1-18A0A0C4DH31 117 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 TEX49A0A1B0GTD5 131 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 Q6JHZ5 121 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 SFTA2Q6UW10 78 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 Q8TAT8 98 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 IFI27L1Q96BM0 104 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 SPEGQ15772 3267 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms