RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TRAV8-3A0A0A6YYJ7 113 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 IGLL5B9A064 214 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 CCL18P55774 89 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 HSD52Q0P140 79 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
TRAPPC9-205ENST00000518839 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 CRPP02741 224 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 TSPEAR-AS2P59090 65 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 TAL2Q16559 108 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 WFDC10BQ8IUB3 73 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 PRR34Q9NV39 138 aa10.27□□□□□ -0.77
TRAPPC9-205ENST00000518839 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 A0A087WZ39 114 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 SNHG12Q9BXW3 62 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
TRAPPC9-205ENST00000518839 NUPR2A6NF83 97 aa10.25□□□□□ -0.77
TRAPPC9-205ENST00000518839 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
TRAPPC9-205ENST00000518839 IGHV3-33P01772 117 aa10.25□□□□□ -0.77
TRAPPC9-205ENST00000518839 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
TRAPPC9-205ENST00000518839 NDUFA12Q9UI09 145 aa10.25□□□□□ -0.77
TRAPPC9-205ENST00000518839 XCL1P47992 114 aa10.24□□□□□ -0.77
TRAPPC9-205ENST00000518839 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-205ENST00000518839 Q8N3U1 123 aa10.24□□□□□ -0.77
TRAPPC9-205ENST00000518839 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-205ENST00000518839 KLK5Q9Y337 293 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-205ENST00000518839 EREGO14944 169 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 NDUFA1O15239 70 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 MIAQ16674 131 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 UPK3BQ9BT76 320 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 LINC00588Q9Y4M8 146 aa10.23□□□□□ -0.77
TRAPPC9-205ENST00000518839 BATFQ16520 125 aa10.22□□□□□ -0.77
TRAPPC9-205ENST00000518839 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
TRAPPC9-205ENST00000518839 SFTA2Q6UW10 78 aa10.22□□□□□ -0.77
TRAPPC9-205ENST00000518839 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
TRAPPC9-205ENST00000518839 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC9-205ENST00000518839 COX7A2LO14548 114 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 HERV-K104P63124 156 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 COX7B2Q8TF08 81 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 UBE2WQ96B02 151 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
TRAPPC9-205ENST00000518839 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
TRAPPC9-205ENST00000518839 TMEM238C9JI98 176 aa10.2□□□□□ -0.78
TRAPPC9-205ENST00000518839 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
TRAPPC9-205ENST00000518839 ORAOV1Q8WV07 137 aa10.2□□□□□ -0.78
TRAPPC9-205ENST00000518839 APLNQ9ULZ1 77 aa10.2□□□□□ -0.78
TRAPPC9-205ENST00000518839 DNAH9Q9NYC9 4486 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 TIMM17BO60830 172 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 APOMO95445 188 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 CEND1Q8N111 149 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
TRAPPC9-205ENST00000518839 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 A6NDN8 102 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 K7EP13 123 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 MALP21145 153 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 GCSHP23434 173 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 FOXI1Q12951 378 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 CIRBPQ14011 172 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 Q9H8V8 135 aa10.18□□□□□ -0.78
TRAPPC9-205ENST00000518839 PRSS2P07478 247 aa10.17□□□□□ -0.78
TRAPPC9-205ENST00000518839 Q6ZVH6 145 aa10.17□□□□□ -0.78
TRAPPC9-205ENST00000518839 Q8IZM0 81 aa10.17□□□□□ -0.78
TRAPPC9-205ENST00000518839 ZNF625Q96I27 306 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-205ENST00000518839 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
TRAPPC9-205ENST00000518839 CXCL5P42830 114 aa10.16□□□□□ -0.78
TRAPPC9-205ENST00000518839 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 A6NJY4 79 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 PTTG1IPP53801 180 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 UBE2DNLQ8IWF7 75 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
TRAPPC9-205ENST00000518839 IBA57-AS1B1ANH7 110 aa10.14□□□□□ -0.79
TRAPPC9-205ENST00000518839 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
TRAPPC9-205ENST00000518839 RMI2Q96E14 147 aa10.14□□□□□ -0.79
TRAPPC9-205ENST00000518839 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
TRAPPC9-205ENST00000518839 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
TRAPPC9-205ENST00000518839 IFITM1P13164 125 aa10.12□□□□□ -0.79
TRAPPC9-205ENST00000518839 FXYD2P54710 66 aa10.12□□□□□ -0.79
TRAPPC9-205ENST00000518839 LITAFQ99732 161 aa10.12□□□□□ -0.79
TRAPPC9-205ENST00000518839 STAB2Q8WWQ8 2551 aa10.11□□□□□ -0.79
TRAPPC9-205ENST00000518839 CKS1BP61024 79 aa10.11□□□□□ -0.79
TRAPPC9-205ENST00000518839 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-205ENST00000518839 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
TRAPPC9-205ENST00000518839 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
TRAPPC9-205ENST00000518839 SMIM13P0DJ93 91 aa10.1□□□□□ -0.79
TRAPPC9-205ENST00000518839 SPAG11BQ08648 103 aa10.1□□□□□ -0.79
TRAPPC9-205ENST00000518839 KIAA0087Q14695 138 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms