RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 OR5A1Q8NGJ0 315 aa4.11□□□□□ -1.75
CD47-205ENST00000517766 FAM104AQ969W3 186 aa4.11□□□□□ -1.75
CD47-205ENST00000517766 TTTY13Q9BZ97 58 aa4.11□□□□□ -1.75
CD47-205ENST00000517766 GEMIN7Q9H840 131 aaKnown RBP4.11□□□□□ -1.75
CD47-205ENST00000517766 HIVEP1P15822 2718 aa4.11□□□□□ -1.75
CD47-205ENST00000517766 NOTCH2Q04721 2471 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 TRBV6-8A0A0A6YYG3 113 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 IGHV4-28A0A0C4DH34 117 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 J3QQQ9 107 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 TAX1BP3O14907 124 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 ATP5G1P05496 136 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 SPART-AS1P0CW21 52 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 DAD1P61803 113 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 HERVK_113P63121 156 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 CEMP1Q6PRD7 247 aaPredicted RBP4.1□□□□□ -1.75
CD47-205ENST00000517766 Q6ZUT4 128 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 Q8NAQ8 132 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 SPANXB1Q9NS25 103 aaPredicted RBP4.1□□□□□ -1.75
CD47-205ENST00000517766 F8P00451 2351 aa4.1□□□□□ -1.75
CD47-205ENST00000517766 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
CD47-205ENST00000517766 LOC100131303A0A0U1RQF7 123 aa4.09□□□□□ -1.75
CD47-205ENST00000517766 SMIM13P0DJ93 91 aa4.09□□□□□ -1.75
CD47-205ENST00000517766 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CD47-205ENST00000517766 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
CD47-205ENST00000517766 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 A0A0J9YY99 117 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 IGHV3-30-3P0DP02 117 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 KRTAP10-11P60412 298 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 SRSF9Q13242 221 aaKnown RBP eCLIP4.08□□□□□ -1.76
CD47-205ENST00000517766 RNASE13Q5GAN3 156 aaKnown RBP4.08□□□□□ -1.76
CD47-205ENST00000517766 LINC00242Q5T6M2 205 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 VSIG2Q96IQ7 327 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 CHCHD5Q9BSY4 110 aa4.08□□□□□ -1.76
CD47-205ENST00000517766 SETD2Q9BYW2 2564 aaPredicted RBP4.07□□□□□ -1.76
CD47-205ENST00000517766 A0A1B0GUV1 79 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 CCL25O15444 150 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 FXYD2P54710 66 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 TSPEAR-AS2P59090 65 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 GAGE6Q13070 117 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 VAMP3Q15836 100 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 MRPL23Q16540 153 aaKnown RBP4.07□□□□□ -1.76
CD47-205ENST00000517766 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 Q6ZVH6 145 aa4.07□□□□□ -1.76
CD47-205ENST00000517766 NHP2Q9NX24 153 aaKnown RBP4.07□□□□□ -1.76
CD47-205ENST00000517766 NOTCH3Q9UM47 2321 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 TEP1Q99973 2627 aaKnown RBP4.06□□□□□ -1.76
CD47-205ENST00000517766 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 TRAV13-1A0A0B4J241 112 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 F5H768 121 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 DEFB4AO15263 64 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 UBE2V1Q13404 147 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 C12orf74Q32Q52 190 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 MPLKIPQ8TAP9 179 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 C11orf68Q9H3H3 251 aaKnown RBP4.06□□□□□ -1.76
CD47-205ENST00000517766 CDKN2A-AS1Q9UH64 79 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 NDUFA12Q9UI09 145 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 CELA1Q9UNI1 258 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 ICOSQ9Y6W8 199 aa4.06□□□□□ -1.76
CD47-205ENST00000517766 TRAV8-3A0A0A6YYJ7 113 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 TMEM262E9PQX1 116 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 G3V4G9 280 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 H3BNG1 76 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 H3BUT2 72 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 NDUFA1O15239 70 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 TIMM17BO60830 172 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 IGHV3-30P01768 117 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 SPINK8P0C7L1 97 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 IGHV3-30-5P0DP03 117 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
CD47-205ENST00000517766 COX6A2Q02221 97 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
CD47-205ENST00000517766 SS18Q15532 418 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 RAB37Q96AX2 223 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 SPANXDQ9BXN6 97 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 SPANXCQ9NY87 97 aa4.05□□□□□ -1.76
CD47-205ENST00000517766 JMJD1CQ15652 2540 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 IGLV4-60A0A075B6I1 120 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.04□□□□□ -1.76
CD47-205ENST00000517766 SMIM1B2RUZ4 78 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 FABP2P12104 132 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 IFITM1P13164 125 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 HERV-K104P63124 156 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 LELP1Q5T871 98 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 C10orf126Q8N4M7 172 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
CD47-205ENST00000517766 A0A096LPF7 62 aa4.03□□□□□ -1.76
CD47-205ENST00000517766 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms