RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 WFDC10BQ8IUB3 73 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 Q8N3U1 123 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 MAPKAPK5-AS1Q8N8E1 139 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 PRKDCP78527 4128 aaKnown RBP5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TRAV8-3A0A0A6YYJ7 113 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 MYMXA0A1B0GTQ4 84 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGHV3-33P01772 117 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 CCL18P55774 89 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 TSPEAR-AS2P59090 65 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 HIGD1BQ9P298 99 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 KLK12Q9UKR0 248 aa5.21□□□□□ -1.58
SCARNA20.1-201ENST00000516009 DYNC2H1Q8NCM8 4307 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGHV3OR16-9A0A0B4J2B5 98 aa5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGLV5-39A0A0G2JS06 123 aa5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 CRPP02741 224 aa5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 XCL1P47992 114 aa5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 SCGB1D4Q6XE38 83 aa5.2□□□□□ -1.58
SCARNA20.1-201ENST00000516009 A0A087WZ39 114 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 NUPR2A6NF83 97 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 SMIM1B2RUZ4 78 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 M0R143 59 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 LINC01556Q5JQF7 62 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 CD164L2Q6UWJ8 174 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 CHCHD10Q8WYQ3 142 aaPredicted RBP5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 PRR34Q9NV39 138 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 LINC00588Q9Y4M8 146 aa5.19□□□□□ -1.58
SCARNA20.1-201ENST00000516009 IGLV10-54A0A075B6I4 117 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 TRAV8-4A0A0B4J246 113 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 EREGO14944 169 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 HINT1P49773 126 aaPredicted RBP5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 HSD52Q0P140 79 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 BATFQ16520 125 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 MIAQ16674 131 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 ZFAND6Q6FIF0 208 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 C5orf38Q86SI9 138 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 LINC01561Q8N1V8 128 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 UBE2WQ96B02 151 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 NDUFA12Q9UI09 145 aa5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 KLK5Q9Y337 293 aaPredicted RBP5.18□□□□□ -1.58
SCARNA20.1-201ENST00000516009 COX7A2LO14548 114 aa5.17□□□□□ -1.58
SCARNA20.1-201ENST00000516009 NDUFA1O15239 70 aa5.17□□□□□ -1.58
SCARNA20.1-201ENST00000516009 ENHOQ6UWT2 76 aa5.17□□□□□ -1.58
SCARNA20.1-201ENST00000516009 UPK3BQ9BT76 320 aa5.17□□□□□ -1.58
SCARNA20.1-201ENST00000516009 APLNQ9ULZ1 77 aa5.17□□□□□ -1.58
SCARNA20.1-201ENST00000516009 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 GAGE12HA6NDE8 117 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 MALP21145 153 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 FOXI1Q12951 378 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 TAL2Q16559 108 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 UBE2DNLQ8IWF7 75 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 Q9H8V8 135 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 TOMM7Q9P0U1 55 aa5.16□□□□□ -1.58
SCARNA20.1-201ENST00000516009 PLECQ15149 4684 aaKnown RBP5.15□□□□□ -1.58
SCARNA20.1-201ENST00000516009 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 APOMO95445 188 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 PRSS2P07478 247 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 GCSHP23434 173 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SRSF9Q13242 221 aaKnown RBP eCLIP5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 CEND1Q8N111 149 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 ORAOV1Q8WV07 137 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 DNAH7Q8WXX0 4024 aa5.15□□□□□ -1.59
SCARNA20.1-201ENST00000516009 IBA57-AS1B1ANH7 110 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 HERV-K104P63124 156 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 CIRBPQ14011 172 aaKnown RBP5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 C6orf226Q5I0X4 101 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 COL5A1-AS1Q5SY13 56 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 SFTA2Q6UW10 78 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 Q8IZM0 81 aa5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 ZNF625Q96I27 306 aaPredicted RBP5.14□□□□□ -1.59
SCARNA20.1-201ENST00000516009 IGKV2D-24A0A075B6R9 120 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 A6NDN8 102 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 K7EP13 123 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 TIMM17BO60830 172 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 PTTG1IPP53801 180 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 MEIG1Q5JSS6 88 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 TM2D2Q9BX73 214 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 Q9HAA7 133 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 FBN3Q75N90 2809 aa5.13□□□□□ -1.59
SCARNA20.1-201ENST00000516009 CSMD3Q7Z407 3707 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 FXYD2P54710 66 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 CKS1BP61024 79 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 KRTAP26-1Q6PEX3 210 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 Q6ZVH6 145 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 RMI2Q96E14 147 aa5.12□□□□□ -1.59
SCARNA20.1-201ENST00000516009 STARD9Q9P2P6 4700 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
SCARNA20.1-201ENST00000516009 A6NJY4 79 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms