RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.68
THUMPD3-210ENST00000515662 CDKN2A-AS1Q9UH64 79 aa10.77□□□□□ -0.68
THUMPD3-210ENST00000515662 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
THUMPD3-210ENST00000515662 RETNQ9HD89 108 aa10.77□□□□□ -0.69
THUMPD3-210ENST00000515662 TRAV13-1A0A0B4J241 112 aa10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 SRSF9Q13242 221 aaKnown RBP eCLIP10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 HERVK_113P63121 156 aa10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 COL6A5A8TX70 2615 aa10.76□□□□□ -0.69
THUMPD3-210ENST00000515662 IGLV4-60A0A075B6I1 120 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 A0A096LPF7 62 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 F5H768 121 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 APOMO95445 188 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 PRO0461Q9UI25 63 aa10.74□□□□□ -0.69
THUMPD3-210ENST00000515662 F8W1H4 67 aa10.73□□□□□ -0.69
THUMPD3-210ENST00000515662 HTN3P15516 51 aa10.73□□□□□ -0.69
THUMPD3-210ENST00000515662 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
THUMPD3-210ENST00000515662 DNAH3Q8TD57 4116 aa10.73□□□□□ -0.69
THUMPD3-210ENST00000515662 TSPAN13O95857 204 aa10.72□□□□□ -0.69
THUMPD3-210ENST00000515662 LOC107984156A0A0G2JMH3 177 aa10.71□□□□□ -0.69
THUMPD3-210ENST00000515662 ARL17AQ8IVW1 177 aa10.71□□□□□ -0.69
THUMPD3-210ENST00000515662 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
THUMPD3-210ENST00000515662 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
THUMPD3-210ENST00000515662 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
THUMPD3-210ENST00000515662 ZFAND6Q6FIF0 208 aa10.7□□□□□ -0.7
THUMPD3-210ENST00000515662 TMEM238C9JI98 176 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 ANK2Q01484 3957 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 PSMB2P49721 201 aa10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
THUMPD3-210ENST00000515662 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
THUMPD3-210ENST00000515662 C11orf68Q9H3H3 251 aaKnown RBP10.68□□□□□ -0.7
THUMPD3-210ENST00000515662 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
THUMPD3-210ENST00000515662 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
THUMPD3-210ENST00000515662 A6NJY4 79 aa10.67□□□□□ -0.7
THUMPD3-210ENST00000515662 ICOSQ9Y6W8 199 aa10.67□□□□□ -0.7
THUMPD3-210ENST00000515662 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
THUMPD3-210ENST00000515662 CFC1P0CG37 223 aa10.67□□□□□ -0.7
THUMPD3-210ENST00000515662 GAGE12HA6NDE8 117 aa10.66□□□□□ -0.7
THUMPD3-210ENST00000515662 NDUFA1O15239 70 aa10.66□□□□□ -0.7
THUMPD3-210ENST00000515662 LITAFQ99732 161 aa10.66□□□□□ -0.7
THUMPD3-210ENST00000515662 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
THUMPD3-210ENST00000515662 EIF4EBP3O60516 100 aaPredicted RBP10.65□□□□□ -0.7
THUMPD3-210ENST00000515662 PRB2P02812 416 aaPredicted RBP10.65□□□□□ -0.7
THUMPD3-210ENST00000515662 IGHV3OR16-9A0A0B4J2B5 98 aa10.63□□□□□ -0.71
THUMPD3-210ENST00000515662 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
THUMPD3-210ENST00000515662 TCL1BO95988 128 aa10.63□□□□□ -0.71
THUMPD3-210ENST00000515662 Q6ZTC4 211 aa10.63□□□□□ -0.71
THUMPD3-210ENST00000515662 H7C2G1 150 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 LELP1Q5T871 98 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 NOTCH1P46531 2555 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 A4D1N5 150 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 Q9H8V8 135 aa10.62□□□□□ -0.71
THUMPD3-210ENST00000515662 H3BNG1 76 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 K7EIL1 84 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 TIMM17BO60830 172 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 MDFIQ99750 246 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 SPANXDQ9BXN6 97 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 SPANXCQ9NY87 97 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 Q8N3U1 123 aa10.61□□□□□ -0.71
THUMPD3-210ENST00000515662 A0A087WZ39 114 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 SS18Q15532 418 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 J3QR89 54 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 FOXI1Q12951 378 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 MIAQ16674 131 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 KPRPQ5T749 579 aaPredicted RBP10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
THUMPD3-210ENST00000515662 NBEAL1Q6ZS30 2694 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 SPATA25Q9BR10 227 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 PRSS2P07478 247 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 NANOS2P60321 138 aaKnown RBP10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 C11orf45Q8TAV5 145 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
THUMPD3-210ENST00000515662 ANGP03950 147 aaKnown RBP10.58□□□□□ -0.72
THUMPD3-210ENST00000515662 SCGB1C2P0DMR2 95 aa10.58□□□□□ -0.72
THUMPD3-210ENST00000515662 XCL1P47992 114 aa10.58□□□□□ -0.72
THUMPD3-210ENST00000515662 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
THUMPD3-210ENST00000515662 TM2D3Q9BRN9 247 aa10.58□□□□□ -0.72
THUMPD3-210ENST00000515662 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
THUMPD3-210ENST00000515662 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
THUMPD3-210ENST00000515662 HERV-K104P63124 156 aa10.57□□□□□ -0.72
THUMPD3-210ENST00000515662 DEFB121Q5J5C9 76 aa10.57□□□□□ -0.72
THUMPD3-210ENST00000515662 NPC2P61916 151 aa10.56□□□□□ -0.72
THUMPD3-210ENST00000515662 REG3AQ06141 175 aa10.56□□□□□ -0.72
THUMPD3-210ENST00000515662 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms