RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SPANXA1Q9NS26 97 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 UBE2D4Q9Y2X8 147 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 LRP1BQ9NZR2 4599 aa5.38□□□□□ -1.55
NEDD4-210ENST00000513957 ZNF664Q8N3J9 261 aa5.38□□□□□ -1.55
NEDD4-210ENST00000513957 NXT2Q9NPJ8 142 aaKnown RBP5.38□□□□□ -1.55
NEDD4-210ENST00000513957 RPS10P5Q9NQ39 176 aa5.38□□□□□ -1.55
NEDD4-210ENST00000513957 IGLV10-54A0A075B6I4 117 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 APOC3P02656 99 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 MRPS36P82909 103 aaKnown RBP5.37□□□□□ -1.55
NEDD4-210ENST00000513957 WFDC2Q14508 124 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 SS18Q15532 418 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 ORMDL2Q53FV1 153 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 Q8N8P6 123 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 PYGO1Q9Y3Y4 419 aa5.37□□□□□ -1.55
NEDD4-210ENST00000513957 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
NEDD4-210ENST00000513957 C1orf196B1AJZ1 125 aa5.36□□□□□ -1.55
NEDD4-210ENST00000513957 LECT2O14960 151 aa5.36□□□□□ -1.55
NEDD4-210ENST00000513957 IFI27P40305 119 aaPredicted RBP5.36□□□□□ -1.55
NEDD4-210ENST00000513957 CHCHD10Q8WYQ3 142 aaPredicted RBP5.36□□□□□ -1.55
NEDD4-210ENST00000513957 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
NEDD4-210ENST00000513957 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
NEDD4-210ENST00000513957 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.35□□□□□ -1.55
NEDD4-210ENST00000513957 CNBPP62633 177 aaKnown RBP5.35□□□□□ -1.55
NEDD4-210ENST00000513957 CYSLTR1Q9Y271 337 aa5.35□□□□□ -1.55
NEDD4-210ENST00000513957 PKIGQ9Y2B9 76 aa5.35□□□□□ -1.55
NEDD4-210ENST00000513957 GVQW2A0A096LPI5 108 aaPredicted RBP5.34□□□□□ -1.55
NEDD4-210ENST00000513957 IGKV3OR2-268A0A0C4DH90 116 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 KRTAP10-1P60331 282 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 FOXI1Q12951 378 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 Q6ZSA8 131 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 Q6ZUT4 128 aa5.34□□□□□ -1.55
NEDD4-210ENST00000513957 IGHV1-58A0A0C4DH39 117 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 LOC389332A0A1B0GUA5 103 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 LINC01546A6NGU7 62 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 PRSS1P07477 247 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 XCL1P47992 114 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 SEC61GP60059 68 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
NEDD4-210ENST00000513957 C2orf66Q6UXQ4 117 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 Q6ZN92 141 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 C9orf163Q8N9P6 203 aa5.33□□□□□ -1.56
NEDD4-210ENST00000513957 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
NEDD4-210ENST00000513957 APOMO95445 188 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 Q8N1X5 172 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 PRSS3P2Q8NHM4 247 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 TIMM17AQ99595 171 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 C2orf88Q9BSF0 95 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 HSPG2P98160 4391 aa5.32□□□□□ -1.56
NEDD4-210ENST00000513957 IGLV4-3A0A075B6K6 122 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 IFITM10A6NMD0 228 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 COX7A2LO14548 114 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 FUSP35637 526 aaKnown RBP eCLIP5.31□□□□□ -1.56
NEDD4-210ENST00000513957 XGP55808 180 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 SEC11AP67812 179 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 FABP9Q0Z7S8 132 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 KIAA1644Q3SXP7 199 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 LINC01620Q4KN68 170 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 TEX43Q6ZNM6 134 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 SMCO4Q9NRQ5 59 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 HERC2O95714 4834 aa5.31□□□□□ -1.56
NEDD4-210ENST00000513957 RYR1P21817 5038 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 IGHV3-64A0A075B6Q5 118 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 TGIF2-C20orf24A0A0A6YYL0 155 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 FAM104AQ969W3 186 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 YPEL4Q96NS1 127 aa5.3□□□□□ -1.56
NEDD4-210ENST00000513957 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 RAB5BP61020 215 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
NEDD4-210ENST00000513957 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 FA2HQ7L5A8 372 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 OR10D4PQ8NGN7 298 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 AMELXQ99217 191 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 CHAC1Q9BUX1 264 aa5.29□□□□□ -1.56
NEDD4-210ENST00000513957 UBE2D1P51668 147 aa5.28□□□□□ -1.56
NEDD4-210ENST00000513957 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
NEDD4-210ENST00000513957 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
NEDD4-210ENST00000513957 C2orf48Q96LS8 159 aa5.28□□□□□ -1.56
NEDD4-210ENST00000513957 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
NEDD4-210ENST00000513957 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
NEDD4-210ENST00000513957 A0A087WZ39 114 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 EPM2AB3EWF7 344 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 LINC00614P0C842 121 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 HERVK_113P63121 156 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 HIGD2BQ4VC39 106 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 LINC00242Q5T6M2 205 aa5.27□□□□□ -1.57
NEDD4-210ENST00000513957 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms