RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IGKV2D-24A0A075B6R9 120 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 LINC01546A6NGU7 62 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 NCR3O14931 201 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 Q6YL49 198 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 DEFB135Q30KP9 77 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 ESM1Q9NQ30 184 aa8.34□□□□□ -1.07
TCOF1-211ENST00000513346 USP24Q9UPU5 2620 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 Q6JHZ5 121 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 CFAP54Q96N23 3096 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 TET2Q6N021 2002 aaPredicted RBP8.33□□□□□ -1.08
TCOF1-211ENST00000513346 TRBV10-1A0A0K0K1A3 114 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
TCOF1-211ENST00000513346 FAM222AQ5U5X8 452 aa8.33□□□□□ -1.08
TCOF1-211ENST00000513346 NREPQ16612 68 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 TRBV7-7A0A0K0K1E9 115 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 SLPIP03973 132 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
TCOF1-211ENST00000513346 LY6G6DO95868 133 aa8.31□□□□□ -1.08
TCOF1-211ENST00000513346 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
TCOF1-211ENST00000513346 V9GYY9 64 aa8.31□□□□□ -1.08
TCOF1-211ENST00000513346 EXPH5Q8NEV8 1989 aa8.31□□□□□ -1.08
TCOF1-211ENST00000513346 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
TCOF1-211ENST00000513346 DEFB4AO15263 64 aa8.3□□□□□ -1.08
TCOF1-211ENST00000513346 CRYGDP07320 174 aa8.3□□□□□ -1.08
TCOF1-211ENST00000513346 CCL18P55774 89 aa8.3□□□□□ -1.08
TCOF1-211ENST00000513346 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
TCOF1-211ENST00000513346 KLLNB2CW77 178 aa8.3□□□□□ -1.08
TCOF1-211ENST00000513346 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
TCOF1-211ENST00000513346 MAP6D1Q9H9H5 199 aa8.29□□□□□ -1.08
TCOF1-211ENST00000513346 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
TCOF1-211ENST00000513346 K7EQG2 157 aa8.29□□□□□ -1.08
TCOF1-211ENST00000513346 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
TCOF1-211ENST00000513346 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 IBA57-AS1B1ANH7 110 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 Q6ZSV7 163 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 Q8N6K4 173 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 NDUFC1O43677 76 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 FUSP35637 526 aaKnown RBP eCLIP8.28□□□□□ -1.08
TCOF1-211ENST00000513346 C9orf85Q96MD7 179 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 SMR3AQ99954 134 aa8.28□□□□□ -1.08
TCOF1-211ENST00000513346 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
TCOF1-211ENST00000513346 PROK1P58294 105 aa8.27□□□□□ -1.09
TCOF1-211ENST00000513346 IL17DQ8TAD2 202 aa8.27□□□□□ -1.09
TCOF1-211ENST00000513346 UBE2D4Q9Y2X8 147 aa8.27□□□□□ -1.09
TCOF1-211ENST00000513346 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
TCOF1-211ENST00000513346 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
TCOF1-211ENST00000513346 F8W735 103 aaPredicted RBP8.26□□□□□ -1.09
TCOF1-211ENST00000513346 SMIM11BQ8TCY0 68 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 A0A087WVE0 104 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 C10orf99Q6UWK7 81 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 SERP1Q9Y6X1 66 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 CHD6Q8TD26 2715 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 MRGPRG-AS1Q2M3A8 158 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
TCOF1-211ENST00000513346 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 CAMK2N2Q96S95 79 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 UBE2BP63146 152 aa8.24□□□□□ -1.09
TCOF1-211ENST00000513346 HILS1P60008 231 aa8.23□□□□□ -1.09
TCOF1-211ENST00000513346 C1orf195Q5TG92 126 aa8.23□□□□□ -1.09
TCOF1-211ENST00000513346 IGHV4-28A0A0C4DH34 117 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 MP68P56378 58 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
TCOF1-211ENST00000513346 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
TCOF1-211ENST00000513346 AMELXQ99217 191 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 COL4A2P08572 1712 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 A0A1W2PPR1 153 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 CCKP06307 115 aa8.22□□□□□ -1.09
TCOF1-211ENST00000513346 ADAMTS20P59510 1910 aa8.21□□□□□ -1.09
TCOF1-211ENST00000513346 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.09
TCOF1-211ENST00000513346 CRYGAP11844 174 aa8.21□□□□□ -1.09
TCOF1-211ENST00000513346 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
TCOF1-211ENST00000513346 BPY2O14599 106 aa8.21□□□□□ -1.1
TCOF1-211ENST00000513346 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
TCOF1-211ENST00000513346 Q6ZTI0 123 aa8.21□□□□□ -1.1
TCOF1-211ENST00000513346 SCXQ7RTU7 201 aa8.21□□□□□ -1.1
TCOF1-211ENST00000513346 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
TCOF1-211ENST00000513346 COX7BP24311 80 aa8.2□□□□□ -1.1
TCOF1-211ENST00000513346 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
TCOF1-211ENST00000513346 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
TCOF1-211ENST00000513346 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
TCOF1-211ENST00000513346 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
TCOF1-211ENST00000513346 ZNF702PQ9H963 129 aa8.19□□□□□ -1.1
TCOF1-211ENST00000513346 EYSQ5T1H1 3165 aa8.19□□□□□ -1.1
TCOF1-211ENST00000513346 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
TCOF1-211ENST00000513346 FHL3Q13643 280 aa8.18□□□□□ -1.1
TCOF1-211ENST00000513346 C11orf45Q8TAV5 145 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms