RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 USH2AO75445 5202 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 TSC2P49815 1807 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 KIAA1109Q2LD37 5005 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 KTN1Q86UP2 1357 aaKnown RBP-0.32□□□□□ -2.46
SMN1-208ENST00000513228 LAMA5O15230 3695 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 ZANQ9Y493 2812 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 RYR1P21817 5038 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 HMGXB3Q12766 1538 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 TULP4Q9NRJ4 1543 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 PTPN13Q12923 2485 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 MYOM2P54296 1465 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 SHANK2Q9UPX8 1470 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 A0A1B0GV90 55 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 IGLC1P0CG04 106 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 SPRR1BP22528 89 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 DEFB123Q8N688 67 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 DPH3P1Q9H4G8 78 aa-0.32□□□□□ -2.46
SMN1-208ENST00000513228 WDR7Q9Y4E6 1490 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 UBE2L5PA0A1B0GUS4 154 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 DLEU1O43261 78 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 MGPP08493 103 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 COX6B1P14854 86 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 UBE2L3P68036 154 aaKnown RBP-0.33□□□□□ -2.46
SMN1-208ENST00000513228 C10orf113Q5VZT2 155 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 FAM223AQ8IWN6 122 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
SMN1-208ENST00000513228 NXT2Q9NPJ8 142 aaKnown RBP-0.33□□□□□ -2.46
SMN1-208ENST00000513228 EHBP1L1Q8N3D4 1523 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 SCN7AQ01118 1682 aa-0.33□□□□□ -2.46
SMN1-208ENST00000513228 EPPK1P58107 5090 aaKnown RBP-0.34□□□□□ -2.46
SMN1-208ENST00000513228 GAPVD1Q14C86 1478 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 SNAPC5O75971 98 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 KRTAP19-7Q3SYF9 63 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 FAM167A-AS1Q96KT0 104 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 SCAPERQ9BY12 1400 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 UQCR10Q9UDW1 63 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 ARL2-SNX15V9GYD0 113 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 CHD6Q8TD26 2715 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 PDZD2O15018 2839 aa-0.34□□□□□ -2.46
SMN1-208ENST00000513228 LRP1BQ9NZR2 4599 aa-0.35□□□□□ -2.46
SMN1-208ENST00000513228 POLA1P09884 1462 aaPredicted RBP-0.35□□□□□ -2.46
SMN1-208ENST00000513228 MAGI1Q96QZ7 1491 aaPredicted RBP-0.35□□□□□ -2.46
SMN1-208ENST00000513228 ZFHX3Q15911 3703 aa-0.35□□□□□ -2.47
SMN1-208ENST00000513228 LINC00959A0A1B0GUT2 108 aa-0.35□□□□□ -2.47
SMN1-208ENST00000513228 EFCAB10A6NFE3 127 aa-0.35□□□□□ -2.47
SMN1-208ENST00000513228 STARD9Q9P2P6 4700 aa-0.35□□□□□ -2.47
SMN1-208ENST00000513228 SPTBN1Q01082 2364 aaKnown RBP-0.35□□□□□ -2.47
SMN1-208ENST00000513228 FLNAP21333 2647 aaKnown RBP-0.35□□□□□ -2.47
SMN1-208ENST00000513228 NF1P21359 2839 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 PKD1L1Q8TDX9 2849 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 TCHHQ07283 1943 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 TENM2Q9NT68 2774 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 FAM24AA6NFZ4 105 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 ATP5EP56381 51 aaPredicted RBP-0.36□□□□□ -2.47
SMN1-208ENST00000513228 UBE2D3P61077 147 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 GNG11P61952 73 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 UBE2D2P62837 147 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 Q0VG73 95 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 LCN9Q8WX39 176 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 IER3IP1Q9Y5U9 82 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 ADGRL2O95490 1459 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 DIP2CQ9Y2E4 1556 aa-0.36□□□□□ -2.47
SMN1-208ENST00000513228 PRKDCP78527 4128 aaKnown RBP-0.37□□□□□ -2.47
SMN1-208ENST00000513228 KIAA0556O60303 1618 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 TOP2BQ02880 1626 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 HIVEP1P15822 2718 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 TRBV7-4A0A0J9YYF1 115 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 FAM223BA6NKX1 122 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 SPRR2BP35325 72 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 UBA52P62987 128 aaKnown RBP-0.37□□□□□ -2.47
SMN1-208ENST00000513228 SFTA2Q6UW10 78 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 LINC01600Q96MT4 127 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 MANBALQ9NQG1 85 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 FAIMQ9NVQ4 179 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 RNF213Q63HN8 5207 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 C1orf167Q5SNV9 1468 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 NRKQ7Z2Y5 1582 aa-0.37□□□□□ -2.47
SMN1-208ENST00000513228 CC2D2AQ9P2K1 1620 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 F6UZH7 168 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 CORTO00230 105 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 GNG4P50150 75 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 PPP3R1P63098 170 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 WHAMMP3Q1A5X7 153 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 PZPP20742 1482 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 MRC2Q9UBG0 1479 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 DOPEY1Q5JWR5 2465 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 RYR2Q92736 4967 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 GVINP1Q7Z2Y8 2422 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 SPHKAPQ2M3C7 1700 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 BIRC6Q9NR09 4857 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 ARHGAP5Q13017 1502 aa-0.38□□□□□ -2.47
SMN1-208ENST00000513228 MAP1AP78559 2803 aaPredicted RBP-0.39□□□□□ -2.47
SMN1-208ENST00000513228 EIF4G3O43432 1585 aaKnown RBP-0.39□□□□□ -2.47
SMN1-208ENST00000513228 LINC00587B1AMM8 73 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 MT4P47944 62 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 KLK9Q2XQG4 91 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 SVBPQ8N300 66 aa-0.39□□□□□ -2.47
SMN1-208ENST00000513228 FDCSPQ8NFU4 85 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 260.8 ms