RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 S4R3C0 116 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 TRBV6-6A0A0A6YYG2 114 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 SNRPGP15A8MWD9 76 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 SMIM13P0DJ93 91 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 Q5W150 140 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 TLN1Q9Y490 2541 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 KRTAP24-1Q3LI83 254 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 LINC00467Q9BRT7 94 aa3.92□□□□□ -1.78
TRAPPC11-209ENST00000512476 IGLV2-18A0A075B6J9 118 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 DEFB108AA8MXU0 73 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 F2Z2F3 143 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 KLK12Q9UKR0 248 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 PRRC2CQ9Y520 2896 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 ARFGEF3Q5TH69 2177 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 FXYD6Q9H0Q3 95 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 ZZEF1O43149 2961 aa3.91□□□□□ -1.78
TRAPPC11-209ENST00000512476 KANTRA0A1W2PQU2 76 aa3.9□□□□□ -1.78
TRAPPC11-209ENST00000512476 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.78
TRAPPC11-209ENST00000512476 Q5VV11 94 aa3.9□□□□□ -1.78
TRAPPC11-209ENST00000512476 SMAD5-AS1Q9Y6J3 95 aa3.9□□□□□ -1.78
TRAPPC11-209ENST00000512476 CHD8Q9HCK8 2581 aa3.9□□□□□ -1.78
TRAPPC11-209ENST00000512476 TMEM30CPA0ZSE6 113 aa3.9□□□□□ -1.79
TRAPPC11-209ENST00000512476 IGHV3-53P01767 116 aa3.9□□□□□ -1.79
TRAPPC11-209ENST00000512476 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.79
TRAPPC11-209ENST00000512476 C9orf163Q8N9P6 203 aa3.9□□□□□ -1.79
TRAPPC11-209ENST00000512476 DYNLRB1Q9NP97 96 aa3.9□□□□□ -1.79
TRAPPC11-209ENST00000512476 ATRXP46100 2492 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 PPYP01298 95 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 FXYD4P59646 89 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 Q8N6K4 173 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 IFI27L1Q96BM0 104 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 DSPP15924 2871 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 CADP27708 2225 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 TRBV6-7A0A0A0MS04 114 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 PRB1P04280 392 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 SCRT1Q9BWW7 348 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 PKD1L2Q7Z442 2459 aa3.89□□□□□ -1.79
TRAPPC11-209ENST00000512476 ITPR1Q14643 2758 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 A0A087WYN8 130 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 DEFB108BQ8NET1 73 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 UBALD1Q8TB05 177 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 GAFA1Q96PS6 74 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 PCNX1Q96RV3 2341 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 RP1L1Q8IWN7 2480 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 E7EUB6 86 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 LINC00483Q53H64 154 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
TRAPPC11-209ENST00000512476 SPTA1P02549 2419 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 MAP1BP46821 2468 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 SDHAF1A6NFY7 115 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 MDKP21741 143 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 ZNF818PQ6ZRF7 136 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 COL6A6A6NMZ7 2263 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 EDDM3BP56851 147 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 LINC01600Q96MT4 127 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 C14orf132Q9NPU4 83 aa3.87□□□□□ -1.79
TRAPPC11-209ENST00000512476 FAM223BA6NKX1 122 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 TRAV10A0A0B4J240 114 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 LYNX1G3V0Z9 82 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 LYNX1P0DP58 116 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 KAAG1Q9UBP8 84 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
TRAPPC11-209ENST00000512476 PLCE1Q9P212 2302 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 A0A0J9YX75 114 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 A0A1B0GU33 70 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 UBE2D3P61077 147 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 UBE2D2P62837 147 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 LINC00643Q86TS7 51 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 NMES1Q9C002 83 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 ACACBO00763 2458 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 USP24Q9UPU5 2620 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 F8WEM9 126 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 NDUFC1O43677 76 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 IGLV7-43P04211 117 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 C3orf79P0CE67 100 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 C14orf177Q52M58 125 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 PSENENQ9NZ42 101 aa3.85□□□□□ -1.79
TRAPPC11-209ENST00000512476 HIVEP3Q5T1R4 2406 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 FXYD6-FXYD2A0A087WZ82 144 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 TMSB15BA0A087X1C1 80 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 TRAV12-3A0A0B4J271 114 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 VMO1Q7Z5L0 202 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 RELNP78509 3460 aa3.84□□□□□ -1.79
TRAPPC11-209ENST00000512476 ODF3BA8MYP8 253 aa3.84□□□□□ -1.8
TRAPPC11-209ENST00000512476 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.8
TRAPPC11-209ENST00000512476 TPRP12270 2363 aaKnown RBP3.84□□□□□ -1.8
TRAPPC11-209ENST00000512476 ADGRG4Q8IZF6 3080 aa3.84□□□□□ -1.8
TRAPPC11-209ENST00000512476 CACNA1BQ00975 2339 aa3.84□□□□□ -1.8
TRAPPC11-209ENST00000512476 ICE1Q9Y2F5 2266 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 CLPSL1A2RUU4 121 aa3.83□□□□□ -1.8
TRAPPC11-209ENST00000512476 CCL3L1P16619 93 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms