RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
PDLIM5-210ENST00000508216 CNTRLQ7Z7A1 2325 aa7.47□□□□□ -1.21
PDLIM5-210ENST00000508216 MOBPQ13875 183 aa7.46□□□□□ -1.21
PDLIM5-210ENST00000508216 KLK9Q2XQG4 91 aa7.46□□□□□ -1.21
PDLIM5-210ENST00000508216 NTM-AS1Q6ZSK4 140 aa7.46□□□□□ -1.21
PDLIM5-210ENST00000508216 C18orf65Q6ZTR6 163 aa7.46□□□□□ -1.21
PDLIM5-210ENST00000508216 CHD9Q3L8U1 2897 aa7.46□□□□□ -1.22
PDLIM5-210ENST00000508216 EPG5Q9HCE0 2579 aa7.46□□□□□ -1.22
PDLIM5-210ENST00000508216 MUC4Q99102 2169 aa7.46□□□□□ -1.22
PDLIM5-210ENST00000508216 PLA2G1BP04054 148 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-210ENST00000508216 PRM2P04554 102 aa7.46□□□□□ -1.22
PDLIM5-210ENST00000508216 SMIM1B2RUZ4 78 aa7.45□□□□□ -1.22
PDLIM5-210ENST00000508216 ZNRD1Q9P1U0 126 aa7.45□□□□□ -1.22
PDLIM5-210ENST00000508216 CHD8Q9HCK8 2581 aa7.45□□□□□ -1.22
PDLIM5-210ENST00000508216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-210ENST00000508216 C19orf84I3L1E1 186 aa7.44□□□□□ -1.22
PDLIM5-210ENST00000508216 IGKV3-15P01624 115 aa7.44□□□□□ -1.22
PDLIM5-210ENST00000508216 F5P12259 2224 aa7.44□□□□□ -1.22
PDLIM5-210ENST00000508216 CLPSL1A2RUU4 121 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 F5H697 171 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 IGLV3-9A0A075B6K5 115 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 TRBV6-4A0A1B0GX49 114 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 SLPIP03973 132 aa7.43□□□□□ -1.22
PDLIM5-210ENST00000508216 ATRXP46100 2492 aa7.42□□□□□ -1.22
PDLIM5-210ENST00000508216 IGHV3OR16-9A0A0B4J2B5 98 aa7.42□□□□□ -1.22
PDLIM5-210ENST00000508216 A6NED7 52 aa7.42□□□□□ -1.22
PDLIM5-210ENST00000508216 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
PDLIM5-210ENST00000508216 CHD7Q9P2D1 2997 aa7.42□□□□□ -1.22
PDLIM5-210ENST00000508216 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
PDLIM5-210ENST00000508216 CFAP47Q6ZTR5 3102 aa7.41□□□□□ -1.22
PDLIM5-210ENST00000508216 ZFHX2Q9C0A1 2572 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-210ENST00000508216 ASCC3Q8N3C0 2202 aaKnown RBP7.4□□□□□ -1.22
PDLIM5-210ENST00000508216 ZNF843Q8N446 348 aa7.4□□□□□ -1.23
PDLIM5-210ENST00000508216 PRR15LQ9BU68 103 aa7.4□□□□□ -1.23
PDLIM5-210ENST00000508216 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.23
PDLIM5-210ENST00000508216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.23
PDLIM5-210ENST00000508216 IGHV3-49A0A0A0MS15 119 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 IGHV7-81A0A0B4J1V7 117 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 IGLV1-44P01699 117 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 X6R8D5 127 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 APELAP0DMC3 54 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 CCL18P55774 89 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 PRR3P79522 188 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 CASC2Q6XLA1 102 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 MUC7Q8TAX7 377 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
PDLIM5-210ENST00000508216 FBXL19-AS1Q494R0 122 aa7.37□□□□□ -1.23
PDLIM5-210ENST00000508216 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
PDLIM5-210ENST00000508216 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
PDLIM5-210ENST00000508216 CELA1Q9UNI1 258 aa7.37□□□□□ -1.23
PDLIM5-210ENST00000508216 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-210ENST00000508216 PTPRZ1P23471 2315 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-210ENST00000508216 A0A096LNT2 108 aa7.36□□□□□ -1.23
PDLIM5-210ENST00000508216 NPBQ8NG41 125 aa7.36□□□□□ -1.23
PDLIM5-210ENST00000508216 TRANK1O15050 2925 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 MYO15AQ9UKN7 3530 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 K7EQD1 137 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 IGLV1-47P01700 117 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 LINC00208Q96KT6 92 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 PLCE1Q9P212 2302 aa7.35□□□□□ -1.23
PDLIM5-210ENST00000508216 M0R2N4 97 aa7.34□□□□□ -1.23
PDLIM5-210ENST00000508216 FDCSPQ8NFU4 85 aa7.34□□□□□ -1.23
PDLIM5-210ENST00000508216 DNAJC13O75165 2243 aa7.34□□□□□ -1.23
PDLIM5-210ENST00000508216 PTPRQQ9UMZ3 2332 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV3OR16-12A0A075B7B8 117 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV3-16A0A0C4DH30 117 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 A0A1B0GW54 56 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 COX6A2Q02221 97 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 NCOR2Q9Y618 2525 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 CCL3L1P16619 93 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV1-2P23083 117 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 SETXQ7Z333 2677 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
PDLIM5-210ENST00000508216 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
PDLIM5-210ENST00000508216 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-210ENST00000508216 SCXQ7RTU7 201 aa7.32□□□□□ -1.24
PDLIM5-210ENST00000508216 TPRP12270 2363 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-210ENST00000508216 ABCA1O95477 2261 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 DNAH14Q0VDD8 3507 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 ETDCA0A1B0GVM5 59 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV3-53P01767 116 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV1-8P0DP01 117 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 C6orf99Q4VX62 202 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 ACACBO00763 2458 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 FAM186AA6NE01 2351 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 TECTAO75443 2155 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 TRGV2A0A075B6R0 118 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV6-1A0A0B4J1U7 121 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 COX7BP24311 80 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
PDLIM5-210ENST00000508216 IGHV3-73A0A0B4J1V6 119 aa7.3□□□□□ -1.24
PDLIM5-210ENST00000508216 H3BPC8 53 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms