RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 BRD3OSQ6XYD6 125 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 DCANP1Q8TF63 244 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 MRPL35Q9NZE8 188 aaKnown RBP2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 TP73-AS1Q9UF72 201 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 SPCS1Q9Y6A9 102 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 KIF25-AS1Q9Y6Z4 181 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 SPENQ96T58 3664 aaKnown RBP2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 ABCA1O95477 2261 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 CELSR3Q9NYQ7 3312 aa2.86□□□□□ -1.95
CALCOCO2-208ENST00000506971 ZFHX2Q9C0A1 2572 aaPredicted RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 TRBV20-1A0A075B6N2 111 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 IGHV3OR16-8A0A075B7F1 116 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 A0A0J9YX75 114 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 MYMXA0A1B0GTQ4 84 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 FAM168BA1KXE4 195 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 C11orf86A6NJI1 115 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 A8MWV9 139 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 H3BUT2 72 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 MGPP08493 103 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 RNASE3P12724 160 aaKnown RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 RNASE4P34096 147 aaKnown RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 POLR2KP53803 58 aaKnown RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 CMC4P56277 68 aaPredicted RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 C12orf74Q32Q52 190 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 RNASE13Q5GAN3 156 aaKnown RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 PRR9Q5T870 116 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 PCP2Q8IVA1 136 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 VPS25Q9BRG1 176 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 BSNQ9UPA5 3926 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 PRRC2CQ9Y520 2896 aaKnown RBP2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 USP24Q9UPU5 2620 aa2.85□□□□□ -1.95
CALCOCO2-208ENST00000506971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.85□□□□□ -1.952e-14■■■■■ 29.1
CALCOCO2-208ENST00000506971 ABCA2Q9BZC7 2435 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 FRYQ5TBA9 3013 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 GCN1Q92616 2671 aaKnown RBP2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 TRBV7-3A0A075B6L6 115 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 SDHAF1A6NFY7 115 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 A8MTW9 85 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 C19orf84I3L1E1 186 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 I3L3M4 83 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 CD7P09564 240 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 COX6B1P14854 86 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 LY6EQ16553 131 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 Q8N2B8 174 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 C15orf56Q8N910 161 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 ATP6V0E2Q8NHE4 81 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 LINC01006Q8NI28 216 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 COPS9Q8WXC6 57 aa2.84□□□□□ -1.95
CALCOCO2-208ENST00000506971 AKAP13Q12802 2813 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 IGKV2D-26A0A0A0MRZ7 120 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 M0QY20 66 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 LGALS3P17931 250 aaKnown RBP2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 FXYD2P54710 66 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 LINC00315P59091 139 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 BLCAPP62952 87 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 ZNF56Q15929 161 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 RRN3P1Q2M238 152 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 PLEKHB2Q96CS7 222 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 RMI2Q96E14 147 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 PRADC1Q9BSG0 188 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 NHP2Q9NX24 153 aaKnown RBP2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 ANAPC11Q9NYG5 84 aa2.83□□□□□ -1.96
CALCOCO2-208ENST00000506971 DSPP15924 2871 aaKnown RBP2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 SPTBN1Q01082 2364 aaKnown RBP2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 MYO18BQ8IUG5 2567 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 FBN3Q75N90 2809 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 A0A096LNT2 108 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 TRAV12-3A0A0B4J271 114 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 A0A0B4J2C4 111 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 IGLL5B9A064 214 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 UBE2D1P51668 147 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 FXYD7P58549 80 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 ZFAND6Q6FIF0 208 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 C4orf3Q8WVX3 66 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 MRPL16Q9NX20 251 aaKnown RBP2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 DMXL1Q9Y485 3027 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 SPTBN2O15020 2390 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
CALCOCO2-208ENST00000506971 CEP295Q9C0D2 2601 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 IGLV4-69A0A075B6H9 119 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 A0A0J9YY99 117 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 H3BMG7 143 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 J3QQQ9 107 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 M0R2P5 195 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 LEPROTO15243 131 aa2.81□□□□□ -1.96
CALCOCO2-208ENST00000506971 GNRH2O43555 120 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms