RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TRBV7-1A0A0A6YYK4 115 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 PIGBOS1A0A0B4J2F0 54 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 A0A0D9SG42 100 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 APOC4-APOC2K7ER74 178 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 IFNGP01579 166 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 RBM3P98179 157 aaKnown RBP0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 ASXL3Q9C0F0 2248 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CPSF1Q10570 1443 aaKnown RBP0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 SSC5DA1L4H1 1573 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CHD1O14646 1710 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 SPHKAPQ2M3C7 1700 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 ATMQ13315 3056 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 MAPKBP1O60336 1514 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 CLASP1Q7Z460 1538 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 TOPAZ1Q8N9V7 1692 aa0.43□□□□□ -2.34
TOPBP1-204ENST00000505804 LRP6O75581 1613 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 PZPP20742 1482 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 MGAQ8IWI9 3026 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 TRAV13-2A0A0B4J235 113 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 HCG22E2RYF7 251 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 F6UZH7 168 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 CORTO00230 105 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 SNAPC5O75971 98 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 TNFP01375 233 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 APOC2P02655 101 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 GNG4P50150 75 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 EDDM3BP56851 147 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 CATR1Q13166 79 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 MRPL54Q6P161 138 aaKnown RBP0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 Q96NJ1 140 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 GNG8Q9UK08 70 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 LINC00312Q9Y6C7 94 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 V9GYV3 84 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 PPRC1Q5VV67 1664 aaKnown RBP0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 SLIT1O75093 1534 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
TOPBP1-204ENST00000505804 NWD1Q149M9 1564 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 PPIP5K1Q6PFW1 1433 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 MYOM1P52179 1685 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 KIF21AQ7Z4S6 1674 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 DYNC1H1Q14204 4646 aaKnown RBP0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 OOSP1A8MZH6 123 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 F2Z2F3 143 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 SIX6O95475 246 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 TPPP2P59282 170 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 WHAMMP3Q1A5X7 153 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 C9orf153Q5TBE3 101 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 PPP3R2Q96LZ3 170 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 BPESC1Q9GZL8 116 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 CHD9Q3L8U1 2897 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 PLECQ15149 4684 aaKnown RBP0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 LAMA1P25391 3075 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 GOLGA3Q08378 1498 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 GAPVD1Q14C86 1478 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 ZNF236Q9UL36 1845 aa0.41□□□□□ -2.34
TOPBP1-204ENST00000505804 STARD9Q9P2P6 4700 aa0.4□□□□□ -2.34
TOPBP1-204ENST00000505804 SRRM2Q9UQ35 2752 aaKnown RBP0.4□□□□□ -2.34
TOPBP1-204ENST00000505804 HECTD4Q9Y4D8 3996 aa0.4□□□□□ -2.34
TOPBP1-204ENST00000505804 LRP1Q07954 4544 aaKnown RBP0.4□□□□□ -2.34
TOPBP1-204ENST00000505804 CHD7Q9P2D1 2997 aa0.4□□□□□ -2.34
TOPBP1-204ENST00000505804 CUX1P39880 1505 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 EFCAB6Q5THR3 1501 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 ZFYVE16Q7Z3T8 1539 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 PKD1P98161 4303 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 GVQW2A0A096LPI5 108 aaPredicted RBP0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 ACYP2P14621 99 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 S100A1P23297 94 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 PPP3R1P63098 170 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 MRPS10P82664 201 aaKnown RBP0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 C8orf59Q8N0T1 100 aaPredicted RBP0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 SMIM11BQ8TCY0 68 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 AQP10Q96PS8 301 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 CGREF1Q99674 301 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 WFDC6Q9BQY6 131 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 FAM103A1Q9BTL3 118 aaKnown RBP0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 SBF2Q86WG5 1849 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 DYNC2H1Q8NCM8 4307 aaKnown RBP0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 MRC1P22897 1456 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 UNC13BO14795 1591 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 ARHGEF5Q12774 1597 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 AKAP9Q99996 3911 aa0.4□□□□□ -2.35
TOPBP1-204ENST00000505804 ADGRG4Q8IZF6 3080 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 KCPQ6ZWJ8 1503 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 WNK3Q9BYP7 1800 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 TRGV1A0A0A0MS02 117 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 TRAV1-2A0A0B4J238 106 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 PRH1P02810 166 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 PI4KAP42356 2102 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 CCL18P55774 89 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 C10orf128Q5T292 105 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 COMMD6Q7Z4G1 85 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 VMO1Q7Z5L0 202 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 C5orf38Q86SI9 138 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 TTC9CQ8N5M4 171 aa0.39□□□□□ -2.35
TOPBP1-204ENST00000505804 PRR15LQ9BU68 103 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms