RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 URB1O60287 2271 aaKnown RBP0.15□□□□□ -2.39
CHD1-203ENST00000505657 ARHGEF12Q9NZN5 1544 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 FAM223AQ8IWN6 122 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 Q8IZM0 81 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 TP53AIP1Q9HCN2 124 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 NXT2Q9NPJ8 142 aaKnown RBP0.15□□□□□ -2.39
CHD1-203ENST00000505657 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 ARL2-SNX15V9GYD0 113 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 SHANK2Q9UPX8 1470 aa0.15□□□□□ -2.39
CHD1-203ENST00000505657 PIEZO2Q9H5I5 2752 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 EHBP1L1Q8N3D4 1523 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 CSMD3Q7Z407 3707 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 MGPP08493 103 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 IGLC1P0CG04 106 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 VWFP04275 2813 aa0.14□□□□□ -2.39
CHD1-203ENST00000505657 HMGXB3Q12766 1538 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 C20orf202A1L168 122 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 NAP1L6A6NFF2 107 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 WFDC2Q14508 124 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 FAM167A-AS1Q96KT0 104 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 GVINP1Q7Z2Y8 2422 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 NSD3Q9BZ95 1437 aa0.13□□□□□ -2.39
CHD1-203ENST00000505657 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 CRYM-AS1A6NIL9 109 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 I3L2K1 104 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 TRAPPC2P0DI81 140 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 TRAPPC2BP0DI82 140 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 UBA52P62987 128 aaKnown RBP0.12□□□□□ -2.39
CHD1-203ENST00000505657 HSD52Q0P140 79 aa0.12□□□□□ -2.39
CHD1-203ENST00000505657 DIP2CQ9Y2E4 1556 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 TRBV6-1A0A0K0K1D8 114 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 UBE2D3P61077 147 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 UBE2D2P62837 147 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 WHAMMP3Q1A5X7 153 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 DEFB109BQ30KR1 87 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 PRO1854Q9UHT4 67 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 PKD1L1Q8TDX9 2849 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
CHD1-203ENST00000505657 CSPG4Q6UVK1 2322 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 ZFYVE16Q7Z3T8 1539 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 COX6CP09669 75 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 C10orf113Q5VZT2 155 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 FDCSPQ8NFU4 85 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 C12orf57Q99622 126 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 COL4A6Q14031 1691 aa0.1□□□□□ -2.39
CHD1-203ENST00000505657 hADV29S1A0JD25 119 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 FAM223BA6NKX1 122 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 S100PP25815 95 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 PIGYQ3MUY2 71 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 TMEM263Q8WUH6 116 aaKnown RBP0.09□□□□□ -2.4
CHD1-203ENST00000505657 SPRR4Q96PI1 79 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 POLA1P09884 1462 aaPredicted RBP0.09□□□□□ -2.4
CHD1-203ENST00000505657 PAPPA2Q9BXP8 1791 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 DNAJC13O75165 2243 aa0.09□□□□□ -2.4
CHD1-203ENST00000505657 XRN1Q8IZH2 1706 aaKnown RBP0.08□□□□□ -2.4
CHD1-203ENST00000505657 C10orf142B7Z368 130 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 TMEM262E9PQX1 116 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 H3BQ15 152 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 SPRR1AP35321 89 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 Q5VSD8 79 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 LCN9Q8WX39 176 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 ADGRL2O95490 1459 aa0.08□□□□□ -2.4
CHD1-203ENST00000505657 KNDC1Q76NI1 1749 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 MACF1Q9UPN3 7388 aaKnown RBP0.07□□□□□ -2.4
CHD1-203ENST00000505657 PTPN13Q12923 2485 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 A0A1B0GWA3 101 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 ATP6V1G2-DDX39BF2Z307 99 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 KRTDAPP60985 99 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 SEC11AP67812 179 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 LINC01600Q96MT4 127 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
CHD1-203ENST00000505657 MAGI1Q96QZ7 1491 aaPredicted RBP0.07□□□□□ -2.4
CHD1-203ENST00000505657 TENM4Q6N022 2769 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 ANKRD17O75179 2603 aaKnown RBP0.06□□□□□ -2.4
CHD1-203ENST00000505657 ABCC5O15440 1437 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 C1orf167Q5SNV9 1468 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 C14orf144Q96I85 54 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 CGREF1Q99674 301 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 FMN2Q9NZ56 1722 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 AKAP12Q02952 1782 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 FLNCQ14315 2725 aa0.06□□□□□ -2.4
CHD1-203ENST00000505657 MYH4Q9Y623 1939 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 NLRP1Q9C000 1473 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 MARF1Q9Y4F3 1742 aaKnown RBP0.05□□□□□ -2.4
CHD1-203ENST00000505657 TMEM218A2RU14 115 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 S100A10P60903 97 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 TCEAL7Q9BRU2 100 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 PRO1933Q9H354 126 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 CACNA1AO00555 2505 aa0.05□□□□□ -2.4
CHD1-203ENST00000505657 MON2Q7Z3U7 1717 aa0.04□□□□□ -2.4
CHD1-203ENST00000505657 MRC2Q9UBG0 1479 aa0.04□□□□□ -2.4
CHD1-203ENST00000505657 SPTA1P02549 2419 aa0.04□□□□□ -2.4
CHD1-203ENST00000505657 GNGT2O14610 69 aa0.04□□□□□ -2.4
CHD1-203ENST00000505657 SAA2P0DJI9 122 aaPredicted RBP0.04□□□□□ -2.4
CHD1-203ENST00000505657 A0A0G2JMZ2 1700 aa0.04□□□□□ -2.4
CHD1-203ENST00000505657 ATRQ13535 2644 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 TULP4Q9NRJ4 1543 aa0.03□□□□□ -2.4
CHD1-203ENST00000505657 A0A087WVE0 104 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms