RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 HERC1Q15751 4861 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 POLA1P09884 1462 aaPredicted RBP0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 PZPP20742 1482 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 CHD9Q3L8U1 2897 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 PEG3Q9GZU2 1588 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 BTAF1O14981 1849 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 A0A1B0GWA3 101 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 C10orf142B7Z368 130 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 BCE1O60756 84 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 S100PP25815 95 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 SNCAP37840 140 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 WFDC2Q14508 124 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 DEFB109BQ30KR1 87 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 FAM223AQ8IWN6 122 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 LINC00474Q9P2X8 69 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 AP4S1Q9Y587 144 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 PLCE1Q9P212 2302 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 ARHGEF12Q9NZN5 1544 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 DOPEY2Q9Y3R5 2298 aa0.16□□□□□ -2.38
UBE2D3-218ENST00000505009 ZNF292O60281 2723 aa0.15□□□□□ -2.38
UBE2D3-218ENST00000505009 ANK2Q01484 3957 aa0.15□□□□□ -2.38
UBE2D3-218ENST00000505009 NCOA3Q9Y6Q9 1424 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 EHBP1L1Q8N3D4 1523 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 TMEM262E9PQX1 116 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 UBE2D3P61077 147 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 UBE2D2P62837 147 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 HSD52Q0P140 79 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 TMEM263Q8WUH6 116 aaKnown RBP0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 CGREF1Q99674 301 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 SPHKAPQ2M3C7 1700 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 DIP2CQ9Y2E4 1556 aa0.15□□□□□ -2.39
UBE2D3-218ENST00000505009 TOPAZ1Q8N9V7 1692 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 EPPK1P58107 5090 aaKnown RBP0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 HMCN2Q8NDA2 5059 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 CC2D2AQ9P2K1 1620 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 ABCA13Q86UQ4 5058 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 ABCA3Q99758 1704 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 PKDREJQ9NTG1 2253 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 TRBV7-4A0A0J9YYF1 115 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 TMEM218A2RU14 115 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 SYS1-DBNDD2H3BUS1 97 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 NDUFC1O43677 76 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 SAA2P0DJI9 122 aaPredicted RBP0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 SEC11AP67812 179 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 Q5VSD8 79 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 C10orf113Q5VZT2 155 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 SFTA2Q6UW10 78 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 MYO7BQ6PIF6 2116 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 SETBP1Q9Y6X0 1596 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 RNF213Q63HN8 5207 aa0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 PDCD11Q14690 1871 aaKnown RBP0.14□□□□□ -2.39
UBE2D3-218ENST00000505009 C2CD3Q4AC94 2353 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 PAPPAQ13219 1627 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 FAM223BA6NKX1 122 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 COX6B1P14854 86 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 USMG5Q96IX5 58 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 LINC00472Q9H8W2 130 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 CCDC141Q6ZP82 1450 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 MAGI1Q96QZ7 1491 aaPredicted RBP0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 ARHGEF5Q12774 1597 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 SCN7AQ01118 1682 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 PPRC1Q5VV67 1664 aaKnown RBP0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 UBR5O95071 2799 aaPredicted RBP0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 AKAP6Q13023 2319 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 GOLGA4Q13439 2230 aaKnown RBP0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 TSC2P49815 1807 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 CHD1O14646 1710 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 HMGXB3Q12766 1538 aa0.13□□□□□ -2.39
UBE2D3-218ENST00000505009 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 GAPVD1Q14C86 1478 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 FYCO1Q9BQS8 1478 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 PTPRQQ9UMZ3 2332 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 hADV29S1A0JD25 119 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 H3BQF6 201 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 I3L2K1 104 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 ATOX1O00244 68 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 GNGT2O14610 69 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 UQCRHP07919 91 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 LINC00032P0C843 101 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 COX8AP10176 69 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 S100A10P60903 97 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 KRTAP20-1Q3LI63 56 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 PSMG4Q5JS54 123 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 LINC01600Q96MT4 127 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 SPRR4Q96PI1 79 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 FXYD6Q9H0Q3 95 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 A0A0G2JMZ2 1700 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 ZFYVE16Q7Z3T8 1539 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 NCOR1O75376 2440 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
UBE2D3-218ENST00000505009 USF3Q68DE3 2245 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 BPTFQ12830 3046 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 C1orf167Q5SNV9 1468 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 MRC2Q9UBG0 1479 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms