RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CCDC179H3BU77 68 aa10.57□□□□□ -0.72
SNF8-203ENST00000504000 CRPP02741 224 aa10.57□□□□□ -0.72
SNF8-203ENST00000504000 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
SNF8-203ENST00000504000 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
SNF8-203ENST00000504000 ACACBO00763 2458 aa10.57□□□□□ -0.72
SNF8-203ENST00000504000 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
SNF8-203ENST00000504000 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
SNF8-203ENST00000504000 KRTAP10-9P60411 292 aa10.56□□□□□ -0.72
SNF8-203ENST00000504000 TRGV2A0A075B6R0 118 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 IGHV3OR16-9A0A0B4J2B5 98 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 H0YGX0 51 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 KRTAP1-3Q8IUG1 177 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 CSNK1G2-AS1Q8NCQ2 148 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 SND1-IT1Q9HBX3 110 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
SNF8-203ENST00000504000 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 A0A087WZ39 114 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 ATP5G1P05496 136 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 MALP21145 153 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 CXCL5P42830 114 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 LINC00337Q8N6G1 96 aa10.54□□□□□ -0.72
SNF8-203ENST00000504000 C19orf73Q9NVV2 129 aa10.53□□□□□ -0.72
SNF8-203ENST00000504000 POLQO75417 2590 aa10.53□□□□□ -0.72
SNF8-203ENST00000504000 IGLV1-51P01701 117 aa10.53□□□□□ -0.72
SNF8-203ENST00000504000 TEX15Q9BXT5 2789 aa10.52□□□□□ -0.72
SNF8-203ENST00000504000 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
SNF8-203ENST00000504000 C16orf95Q9H693 158 aa10.52□□□□□ -0.73
SNF8-203ENST00000504000 FHL2Q14192 279 aa10.51□□□□□ -0.73
SNF8-203ENST00000504000 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
SNF8-203ENST00000504000 NAV2Q8IVL1 2488 aa10.51□□□□□ -0.73
SNF8-203ENST00000504000 LOC100131303A0A0U1RQF7 123 aa10.5□□□□□ -0.73
SNF8-203ENST00000504000 A0A1W2PRX2 142 aa10.5□□□□□ -0.73
SNF8-203ENST00000504000 CCL18P55774 89 aa10.5□□□□□ -0.73
SNF8-203ENST00000504000 PTPN13Q12923 2485 aa10.5□□□□□ -0.73
SNF8-203ENST00000504000 IGLV4-60A0A075B6I1 120 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 LINC00158P58513 81 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 LINC01561Q8N1V8 128 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 SMIM11BQ8TCY0 68 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 OBSCN-AS1Q96MR7 158 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 UBR5O95071 2799 aaPredicted RBP10.49□□□□□ -0.73
SNF8-203ENST00000504000 DNAL4O96015 105 aa10.49□□□□□ -0.73
SNF8-203ENST00000504000 CHD6Q8TD26 2715 aa10.48□□□□□ -0.73
SNF8-203ENST00000504000 ESM1Q9NQ30 184 aa10.48□□□□□ -0.73
SNF8-203ENST00000504000 TOMM7Q9P0U1 55 aa10.48□□□□□ -0.73
SNF8-203ENST00000504000 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 KIR2DL5BQ8NHK3 375 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 FAM208BQ5VWN6 2430 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 AKAP9Q99996 3911 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 A0A1B0GUV1 79 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 LY6G6DO95868 133 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 LINC01006Q8NI28 216 aa10.47□□□□□ -0.73
SNF8-203ENST00000504000 LRRK2Q5S007 2527 aa10.46□□□□□ -0.73
SNF8-203ENST00000504000 LINC00959A0A1B0GUT2 108 aa10.46□□□□□ -0.74
SNF8-203ENST00000504000 RNASE1P07998 156 aaKnown RBP10.46□□□□□ -0.74
SNF8-203ENST00000504000 Q9HAA7 133 aa10.46□□□□□ -0.74
SNF8-203ENST00000504000 RPL35AP18077 110 aaKnown RBP10.45□□□□□ -0.74
SNF8-203ENST00000504000 CENPEQ02224 2701 aa10.45□□□□□ -0.74
SNF8-203ENST00000504000 A0A087WYN8 130 aa10.44□□□□□ -0.74
SNF8-203ENST00000504000 PRB1P04280 392 aa10.44□□□□□ -0.74
SNF8-203ENST00000504000 A0A1B0GX51 115 aa10.44□□□□□ -0.74
SNF8-203ENST00000504000 Q8IZM0 81 aa10.44□□□□□ -0.74
SNF8-203ENST00000504000 ZNF843Q8N446 348 aa10.44□□□□□ -0.74
SNF8-203ENST00000504000 ZNF462Q96JM2 2506 aa10.43□□□□□ -0.74
SNF8-203ENST00000504000 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
SNF8-203ENST00000504000 WFDC10AQ9H1F0 79 aa10.43□□□□□ -0.74
SNF8-203ENST00000504000 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
SNF8-203ENST00000504000 BBC3Q96PG8 261 aaPredicted RBP10.42□□□□□ -0.74
SNF8-203ENST00000504000 KLK5Q9Y337 293 aaPredicted RBP10.42□□□□□ -0.74
SNF8-203ENST00000504000 IGKV3OR2-268A0A0C4DH90 116 aa10.42□□□□□ -0.74
SNF8-203ENST00000504000 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
SNF8-203ENST00000504000 SS18Q15532 418 aa10.42□□□□□ -0.74
SNF8-203ENST00000504000 UQCRQO14949 82 aa10.41□□□□□ -0.74
SNF8-203ENST00000504000 PAX4O43316 350 aa10.41□□□□□ -0.74
SNF8-203ENST00000504000 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
SNF8-203ENST00000504000 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
SNF8-203ENST00000504000 WFDC11Q8NEX6 87 aa10.4□□□□□ -0.74
SNF8-203ENST00000504000 LINC00167Q96N53 147 aa10.4□□□□□ -0.74
SNF8-203ENST00000504000 ABCA12Q86UK0 2595 aa10.4□□□□□ -0.75
SNF8-203ENST00000504000 PFN2P35080 140 aa10.4□□□□□ -0.75
SNF8-203ENST00000504000 LECT2O14960 151 aa10.39□□□□□ -0.75
SNF8-203ENST00000504000 NDUFC2O95298 119 aa10.39□□□□□ -0.75
SNF8-203ENST00000504000 COX17Q14061 63 aa10.39□□□□□ -0.75
SNF8-203ENST00000504000 LINC00526Q96FQ7 95 aa10.39□□□□□ -0.75
SNF8-203ENST00000504000 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
SNF8-203ENST00000504000 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
SNF8-203ENST00000504000 Q6JHZ5 121 aa10.38□□□□□ -0.75
SNF8-203ENST00000504000 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
SNF8-203ENST00000504000 PLA2G2AP14555 144 aa10.38□□□□□ -0.75
SNF8-203ENST00000504000 SETXQ7Z333 2677 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms