RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
AP004609.1-201ENST00000498872 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
AP004609.1-201ENST00000498872 NTM-AS1Q6ZSK4 140 aa11.73□□□□□ -0.53
AP004609.1-201ENST00000498872 Q6ZUT4 128 aa11.73□□□□□ -0.53
AP004609.1-201ENST00000498872 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
AP004609.1-201ENST00000498872 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
AP004609.1-201ENST00000498872 LOC100131303A0A0U1RQF7 123 aa11.71□□□□□ -0.53
AP004609.1-201ENST00000498872 TMEM223A0PJW6 202 aa11.71□□□□□ -0.53
AP004609.1-201ENST00000498872 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
AP004609.1-201ENST00000498872 TNP2Q05952 138 aa11.71□□□□□ -0.53
AP004609.1-201ENST00000498872 ZNF815PA8K554 130 aa11.71□□□□□ -0.54
AP004609.1-201ENST00000498872 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.54
AP004609.1-201ENST00000498872 COX11Q9Y6N1 276 aa11.71□□□□□ -0.54
AP004609.1-201ENST00000498872 DYNC1H1Q14204 4646 aaKnown RBP11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 TAL2Q16559 108 aa11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 DGAT2L7PQ6IED9 249 aa11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 C6orf223Q8N319 242 aa11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
AP004609.1-201ENST00000498872 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
AP004609.1-201ENST00000498872 A6NDN8 102 aa11.69□□□□□ -0.54
AP004609.1-201ENST00000498872 LEPROTO15243 131 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 Q9H8V8 135 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 GCSHP23434 173 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 ESRGQ1W209 222 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 Q6ZVH6 145 aa11.68□□□□□ -0.54
AP004609.1-201ENST00000498872 H7C423 109 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 J3QQQ9 107 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 UBE2D1P51668 147 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 CEND1Q8N111 149 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 KRTAP1-5Q9BYS1 174 aa11.67□□□□□ -0.54
AP004609.1-201ENST00000498872 UBE2L6O14933 153 aa11.66□□□□□ -0.54
AP004609.1-201ENST00000498872 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
AP004609.1-201ENST00000498872 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
AP004609.1-201ENST00000498872 FXYD2P54710 66 aa11.65□□□□□ -0.54
AP004609.1-201ENST00000498872 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.54
AP004609.1-201ENST00000498872 SCGB1D4Q6XE38 83 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 PRO0255Q9UI72 69 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 H3BRM9 83 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 TIRAPP58753 221 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
AP004609.1-201ENST00000498872 IGLV5-45A0A087WSX0 123 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 A0A096LPF7 62 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 TRBV6-8A0A0A6YYG3 113 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 H3BNG1 76 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 GYPEP15421 78 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 TMEM101Q96IK0 257 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 CDC42SE2Q9NRR3 84 aa11.63□□□□□ -0.55
AP004609.1-201ENST00000498872 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
AP004609.1-201ENST00000498872 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
AP004609.1-201ENST00000498872 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
AP004609.1-201ENST00000498872 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
AP004609.1-201ENST00000498872 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
AP004609.1-201ENST00000498872 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
AP004609.1-201ENST00000498872 K7EP13 123 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 RYR1P21817 5038 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 HERVK_113P63121 156 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 ATP6V0E2Q8NHE4 81 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 SPANXB1Q9NS25 103 aaPredicted RBP11.6□□□□□ -0.55
AP004609.1-201ENST00000498872 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
AP004609.1-201ENST00000498872 PAX4O43316 350 aa11.59□□□□□ -0.55
AP004609.1-201ENST00000498872 SMIM13P0DJ93 91 aa11.59□□□□□ -0.55
AP004609.1-201ENST00000498872 GAGE6Q13070 117 aa11.59□□□□□ -0.55
AP004609.1-201ENST00000498872 KRTAP4-5Q9BYR2 181 aa11.59□□□□□ -0.55
AP004609.1-201ENST00000498872 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
AP004609.1-201ENST00000498872 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
AP004609.1-201ENST00000498872 CHCHD5Q9BSY4 110 aa11.58□□□□□ -0.56
AP004609.1-201ENST00000498872 CDKN2A-AS1Q9UH64 79 aa11.58□□□□□ -0.56
AP004609.1-201ENST00000498872 ABCA13Q86UQ4 5058 aa11.58□□□□□ -0.56
AP004609.1-201ENST00000498872 VAMP3Q15836 100 aa11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 NHP2Q9NX24 153 aaKnown RBP11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 COX6A2Q02221 97 aa11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
AP004609.1-201ENST00000498872 K7ERJ3 54 aa11.56□□□□□ -0.56
AP004609.1-201ENST00000498872 RAB37Q96AX2 223 aa11.56□□□□□ -0.56
AP004609.1-201ENST00000498872 UBE2V1Q13404 147 aa11.55□□□□□ -0.56
AP004609.1-201ENST00000498872 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
AP004609.1-201ENST00000498872 HSPG2P98160 4391 aa11.55□□□□□ -0.56
AP004609.1-201ENST00000498872 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
AP004609.1-201ENST00000498872 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 A0A0J9YXY3 114 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 A6NJY4 79 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 H3BUT2 72 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 KRTAP10-2P60368 255 aa11.53□□□□□ -0.56
AP004609.1-201ENST00000498872 NDUFA12Q9UI09 145 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms