RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 V9GYV3 84 aa1.55□□□□□ -2.16
VPS36-206ENST00000497149 PREX2Q70Z35 1606 aa1.55□□□□□ -2.16
VPS36-206ENST00000497149 IQGAP3Q86VI3 1631 aa1.55□□□□□ -2.16
VPS36-206ENST00000497149 MYO3AQ8NEV4 1616 aa1.55□□□□□ -2.16
VPS36-206ENST00000497149 TET3O43151 1660 aa1.55□□□□□ -2.16
VPS36-206ENST00000497149 MAP2P11137 1827 aaKnown RBP1.54□□□□□ -2.16
VPS36-206ENST00000497149 LAMA4Q16363 1823 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 SNRPGP15A8MWD9 76 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 H3BVH4 76 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 CCL3L1P16619 93 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 COA5Q86WW8 74 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 FANCD2Q9BXW9 1451 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 URB2Q14146 1524 aaKnown RBP1.54□□□□□ -2.16
VPS36-206ENST00000497149 COL4A6Q14031 1691 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 RGPD1P0DJD0 1748 aa1.54□□□□□ -2.16
VPS36-206ENST00000497149 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 CLPSL1A2RUU4 121 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 UQCR11O14957 56 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 IGLV3-1P01715 115 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 SPINT3P49223 89 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 KDM3BQ7LBC6 1761 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 SDK1Q7Z5N4 2213 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 DEFB132Q7Z7B7 95 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 INTS1Q8N201 2190 aaKnown RBP1.53□□□□□ -2.16
VPS36-206ENST00000497149 MADDQ8WXG6 1647 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 UBE2D4Q9Y2X8 147 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
VPS36-206ENST00000497149 SIP14410 1827 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 ITSN1Q15811 1721 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 NRXN2Q9P2S2 1712 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
VPS36-206ENST00000497149 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
VPS36-206ENST00000497149 M0R135 149 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 NDUFB1O75438 58 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
VPS36-206ENST00000497149 MGPP08493 103 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 HMGA1P17096 107 aaKnown RBP1.52□□□□□ -2.17
VPS36-206ENST00000497149 ATXN8Q156A1 80 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 DEFB119Q8N690 84 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 LINC00846Q9NV44 126 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 ARFGEF2Q9Y6D5 1785 aa1.52□□□□□ -2.17
VPS36-206ENST00000497149 ZNF142P52746 1687 aaPredicted RBP1.51□□□□□ -2.17
VPS36-206ENST00000497149 LRRC37A3O60309 1634 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 SHROOM2Q13796 1616 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 MED13LQ71F56 2210 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 ANKRD36A6QL64 1941 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 TRBV6-5A0A0K0K1A5 114 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 CTXND1A0A1B0GTU2 59 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 C10orf142B7Z368 130 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 M0R3E3 92 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 FXYD4P59646 89 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 C10orf55Q5SWW7 151 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
VPS36-206ENST00000497149 Q6ZSA8 131 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 SMIM4Q8WVI0 70 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 PRR15LQ9BU68 103 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 HILPDAQ9Y5L2 63 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 PLXNC1O60486 1568 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 TIAM1Q13009 1591 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
VPS36-206ENST00000497149 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
VPS36-206ENST00000497149 HMGXB3Q12766 1538 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 CDK13Q14004 1512 aaKnown RBP1.5□□□□□ -2.17
VPS36-206ENST00000497149 ASXL1Q8IXJ9 1541 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 IGKV3D-7A0A0C4DH55 119 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 A0A1B0GUT8 65 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 M0R2N4 97 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 INE1O15225 51 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 CCL18P55774 89 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 WFDC6Q9BQY6 131 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 FAM103A1Q9BTL3 118 aaKnown RBP1.5□□□□□ -2.17
VPS36-206ENST00000497149 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 TOP2BQ02880 1626 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 ABCA9Q8IUA7 1624 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 ARFGEF1Q9Y6D6 1849 aa1.5□□□□□ -2.17
VPS36-206ENST00000497149 DLEC1Q9Y238 1755 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 UBR1Q8IWV7 1749 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 LOC110117498A0A087WWA1 95 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 IL9P15248 144 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 COX17Q14061 63 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 EHBP1L1Q8N3D4 1523 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 SYCP2Q9BX26 1530 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 TNRC6BQ9UPQ9 1833 aaKnown RBP1.49□□□□□ -2.17
VPS36-206ENST00000497149 SIPA1L3O60292 1781 aaPredicted RBP1.49□□□□□ -2.17
VPS36-206ENST00000497149 NKTRP30414 1462 aaKnown RBP1.49□□□□□ -2.17
VPS36-206ENST00000497149 C1orf167Q5SNV9 1468 aa1.49□□□□□ -2.17
VPS36-206ENST00000497149 TARBP1Q13395 1621 aaKnown RBP1.48□□□□□ -2.17
VPS36-206ENST00000497149 RNASE3P12724 160 aaKnown RBP1.48□□□□□ -2.17
VPS36-206ENST00000497149 ZNF137PP52743 207 aa1.48□□□□□ -2.17
VPS36-206ENST00000497149 FXYD3Q14802 87 aa1.48□□□□□ -2.17
VPS36-206ENST00000497149 PROK2Q9HC23 129 aa1.48□□□□□ -2.17
VPS36-206ENST00000497149 MYOM1P52179 1685 aa1.48□□□□□ -2.17
VPS36-206ENST00000497149 ASCC3Q8N3C0 2202 aaKnown RBP1.47□□□□□ -2.17
VPS36-206ENST00000497149 A0A1B0GUL6 1792 aa1.47□□□□□ -2.17
VPS36-206ENST00000497149 RPL37AP61513 92 aaKnown RBP1.47□□□□□ -2.17
VPS36-206ENST00000497149 TMEM263Q8WUH6 116 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms