RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 NOTCH3Q9UM47 2321 aa10.62□□□□□ -0.71
UBXN11-216ENST00000496466 INAFM1C9JVW0 142 aa10.61□□□□□ -0.71
UBXN11-216ENST00000496466 TRIAP1O43715 76 aa10.61□□□□□ -0.71
UBXN11-216ENST00000496466 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
UBXN11-216ENST00000496466 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
UBXN11-216ENST00000496466 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
UBXN11-216ENST00000496466 M0QXV9 152 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 GAGE7O76087 117 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 IFITM1P13164 125 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
UBXN11-216ENST00000496466 TRAV13-1A0A0B4J241 112 aa10.59□□□□□ -0.71
UBXN11-216ENST00000496466 DAND5Q8N907 189 aa10.59□□□□□ -0.71
UBXN11-216ENST00000496466 B5MCH6 92 aa10.59□□□□□ -0.71
UBXN11-216ENST00000496466 CSNK1G2-AS1Q8NCQ2 148 aa10.59□□□□□ -0.71
UBXN11-216ENST00000496466 ICOSQ9Y6W8 199 aa10.59□□□□□ -0.71
UBXN11-216ENST00000496466 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 Q9H8V8 135 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 PF4P02776 101 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
UBXN11-216ENST00000496466 LOC100131303A0A0U1RQF7 123 aa10.57□□□□□ -0.72
UBXN11-216ENST00000496466 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
UBXN11-216ENST00000496466 TMEM243Q9BU79 118 aa10.57□□□□□ -0.72
UBXN11-216ENST00000496466 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
UBXN11-216ENST00000496466 TRBV6-4A0A1B0GX49 114 aa10.56□□□□□ -0.72
UBXN11-216ENST00000496466 F5H768 121 aa10.56□□□□□ -0.72
UBXN11-216ENST00000496466 UBE2L6O14933 153 aa10.56□□□□□ -0.72
UBXN11-216ENST00000496466 Q6Q795 121 aa10.56□□□□□ -0.72
UBXN11-216ENST00000496466 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
UBXN11-216ENST00000496466 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
UBXN11-216ENST00000496466 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
UBXN11-216ENST00000496466 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
UBXN11-216ENST00000496466 RPL13AP40429 203 aaKnown RBP10.55□□□□□ -0.72
UBXN11-216ENST00000496466 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
UBXN11-216ENST00000496466 C2CD3Q4AC94 2353 aa10.55□□□□□ -0.72
UBXN11-216ENST00000496466 FN1P02751 2386 aaKnown RBP10.54□□□□□ -0.72
UBXN11-216ENST00000496466 TRGV4A0A0C4DH28 118 aa10.54□□□□□ -0.72
UBXN11-216ENST00000496466 GAGE2BQ13066 116 aa10.54□□□□□ -0.72
UBXN11-216ENST00000496466 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
UBXN11-216ENST00000496466 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
UBXN11-216ENST00000496466 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
UBXN11-216ENST00000496466 COX6CP09669 75 aa10.53□□□□□ -0.72
UBXN11-216ENST00000496466 A0A0U1RRA0 63 aa10.53□□□□□ -0.72
UBXN11-216ENST00000496466 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
UBXN11-216ENST00000496466 H7C423 109 aa10.52□□□□□ -0.72
UBXN11-216ENST00000496466 FHL2Q14192 279 aa10.52□□□□□ -0.72
UBXN11-216ENST00000496466 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.72
UBXN11-216ENST00000496466 SNCGO76070 127 aa10.52□□□□□ -0.73
UBXN11-216ENST00000496466 PRIMA1Q86XR5 153 aa10.52□□□□□ -0.73
UBXN11-216ENST00000496466 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
UBXN11-216ENST00000496466 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
UBXN11-216ENST00000496466 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
UBXN11-216ENST00000496466 HERV-K104P63124 156 aa10.5□□□□□ -0.73
UBXN11-216ENST00000496466 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
UBXN11-216ENST00000496466 CCDC179H3BU77 68 aa10.5□□□□□ -0.73
UBXN11-216ENST00000496466 LST1O00453 97 aa10.5□□□□□ -0.73
UBXN11-216ENST00000496466 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 VWFP04275 2813 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 TRBV6-8A0A0A6YYG3 113 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 COPS9Q8WXC6 57 aa10.49□□□□□ -0.73
UBXN11-216ENST00000496466 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
UBXN11-216ENST00000496466 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
UBXN11-216ENST00000496466 CRLF1O75462 422 aa10.47□□□□□ -0.73
UBXN11-216ENST00000496466 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
UBXN11-216ENST00000496466 H3BT86 120 aa10.46□□□□□ -0.73
UBXN11-216ENST00000496466 TENM1Q9UKZ4 2725 aa10.46□□□□□ -0.73
UBXN11-216ENST00000496466 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.74
UBXN11-216ENST00000496466 COX7B2Q8TF08 81 aa10.46□□□□□ -0.74
UBXN11-216ENST00000496466 UBE2WQ96B02 151 aa10.46□□□□□ -0.74
UBXN11-216ENST00000496466 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.74
UBXN11-216ENST00000496466 DEFB130BP0DP73 79 aa10.45□□□□□ -0.74
UBXN11-216ENST00000496466 DEFB130AP0DP74 79 aa10.45□□□□□ -0.74
UBXN11-216ENST00000496466 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
UBXN11-216ENST00000496466 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
UBXN11-216ENST00000496466 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
UBXN11-216ENST00000496466 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
UBXN11-216ENST00000496466 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
UBXN11-216ENST00000496466 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
UBXN11-216ENST00000496466 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
UBXN11-216ENST00000496466 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
UBXN11-216ENST00000496466 COX7A2LO14548 114 aa10.42□□□□□ -0.74
UBXN11-216ENST00000496466 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
UBXN11-216ENST00000496466 X6R8D5 127 aa10.42□□□□□ -0.74
UBXN11-216ENST00000496466 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
UBXN11-216ENST00000496466 GYPEP15421 78 aa10.4□□□□□ -0.74
UBXN11-216ENST00000496466 A0A087WZ39 114 aa10.4□□□□□ -0.74
UBXN11-216ENST00000496466 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
UBXN11-216ENST00000496466 ATRQ13535 2644 aa10.39□□□□□ -0.75
UBXN11-216ENST00000496466 NBEAL2Q6ZNJ1 2754 aa10.39□□□□□ -0.75
UBXN11-216ENST00000496466 LINC00959A0A1B0GUT2 108 aa10.39□□□□□ -0.75
UBXN11-216ENST00000496466 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
UBXN11-216ENST00000496466 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
UBXN11-216ENST00000496466 TMEM126AQ9H061 195 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms