RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ATP5G1P05496 136 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 DEFB130BP0DP73 79 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 DEFB130AP0DP74 79 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 DAD1P61803 113 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 LINC00242Q5T6M2 205 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 CEMP1Q6PRD7 247 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-213ENST00000495693 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 C10orf126Q8N4M7 172 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 CHCHD5Q9BSY4 110 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 PRO1854Q9UHT4 67 aa6.06□□□□□ -1.44
EPHA4-213ENST00000495693 IGLV5-39A0A0G2JS06 123 aa6.05□□□□□ -1.44
EPHA4-213ENST00000495693 MIAQ16674 131 aa6.05□□□□□ -1.44
EPHA4-213ENST00000495693 FAM222AQ5U5X8 452 aa6.05□□□□□ -1.44
EPHA4-213ENST00000495693 FAM104AQ969W3 186 aa6.05□□□□□ -1.44
EPHA4-213ENST00000495693 CDKN2A-AS1Q9UH64 79 aa6.05□□□□□ -1.44
EPHA4-213ENST00000495693 IGHV3-64A0A075B6Q5 118 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 TRAV13-1A0A0B4J241 112 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 K7ERJ3 54 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 APOMO95445 188 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 COX6CP09669 75 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 SPINK8P0C7L1 97 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 SS18Q15532 418 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 DEFB135Q30KP9 77 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 C3orf56Q8N813 242 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 Q9UF83 564 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
EPHA4-213ENST00000495693 TENM4Q6N022 2769 aa6.04□□□□□ -1.44
EPHA4-213ENST00000495693 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 IGHV4-28A0A0C4DH34 117 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 SMIM1B2RUZ4 78 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
EPHA4-213ENST00000495693 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
EPHA4-213ENST00000495693 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 UNC79Q9P2D8 2635 aa6.03□□□□□ -1.44
EPHA4-213ENST00000495693 ZNF469Q96JG9 3925 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-213ENST00000495693 CCDC168Q8NDH2 2452 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 TRAV8-3A0A0A6YYJ7 113 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 A4D1N5 150 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 H3BNG1 76 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 CFC1P0CG37 223 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 EGFEM1PQ0D2K5 195 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 C1orf43Q9BWL3 253 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 CENPEQ02224 2701 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 SORL1Q92673 2214 aa6.02□□□□□ -1.45
EPHA4-213ENST00000495693 LOC107984156A0A0G2JMH3 177 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 LOC100131303A0A0U1RQF7 123 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 TSPAN13O95857 204 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 PRSS2P07478 247 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 SCGB1C2P0DMR2 95 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 CXCL5P42830 114 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 PSMB2P49721 201 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 GAGE6Q13070 117 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 Q1RN00 199 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 MEIG1Q5JSS6 88 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 ARL17AQ8IVW1 177 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 Q8NAQ8 132 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 Q9H8V8 135 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 MYO9AB2RTY4 2548 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 NBPF19A0A087WUL8 3843 aa6.01□□□□□ -1.45
EPHA4-213ENST00000495693 SONP18583 2426 aaKnown RBP6□□□□□ -1.45
EPHA4-213ENST00000495693 CHD6Q8TD26 2715 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 A0A087WZ39 114 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 TMEM262E9PQX1 116 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 OCIAD2Q56VL3 154 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 MUC7Q8TAX7 377 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 COX7B2Q8TF08 81 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 LITAFQ99732 161 aa6□□□□□ -1.45
EPHA4-213ENST00000495693 C11orf68Q9H3H3 251 aaKnown RBP6□□□□□ -1.45
EPHA4-213ENST00000495693 TRBV30A0A0K0K1B3 111 aa5.99□□□□□ -1.45
EPHA4-213ENST00000495693 F5H768 121 aa5.99□□□□□ -1.45
EPHA4-213ENST00000495693 M0QXV9 152 aa5.99□□□□□ -1.45
EPHA4-213ENST00000495693 ATXN8Q156A1 80 aa5.99□□□□□ -1.45
EPHA4-213ENST00000495693 LELP1Q5T871 98 aa5.99□□□□□ -1.45
EPHA4-213ENST00000495693 NAA38Q9BRA0 125 aaKnown RBP5.99□□□□□ -1.45
EPHA4-213ENST00000495693 AKAP9Q99996 3911 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 IGHV3OR16-9A0A0B4J2B5 98 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 LINC00959A0A1B0GUT2 108 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 IBA57-AS1B1ANH7 110 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 TRIAP1O43715 76 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 IGHV3-33P01772 117 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 COX6A2Q02221 97 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
EPHA4-213ENST00000495693 ZNF625Q96I27 306 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-213ENST00000495693 TLN2Q9Y4G6 2542 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 TRAV13-2A0A0B4J235 113 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 H3BMG7 143 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 RBX1P62877 108 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 KRTAP24-1Q3LI83 254 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 Q8IZM0 81 aa5.97□□□□□ -1.45
EPHA4-213ENST00000495693 HELZ2Q9BYK8 2649 aaKnown RBP5.97□□□□□ -1.45
EPHA4-213ENST00000495693 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
EPHA4-213ENST00000495693 COX17Q14061 63 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms