RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 TMEM101Q96IK0 257 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 TTTY13Q9BZ97 58 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 PRR34Q9NV39 138 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 TP73-AS1Q9UF72 201 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 CDKN2A-AS1Q9UH64 79 aa4.65□□□□□ -1.67
MSH5-217ENST00000494458 J3QQQ9 107 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 UBE2L6O14933 153 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 NHLRC4P0CG21 123 aaPredicted RBP4.64□□□□□ -1.67
MSH5-217ENST00000494458 IGHV3-30-3P0DP02 117 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 NMUP48645 174 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 TSPEAR-AS2P59090 65 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 NANOS2P60321 138 aaKnown RBP4.64□□□□□ -1.67
MSH5-217ENST00000494458 HERVK_113P61574 105 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 TAL2Q16559 108 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
MSH5-217ENST00000494458 DEFB121Q5J5C9 76 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 AMMECR1LQ6DCA0 310 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 PLEKHB2Q96CS7 222 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 CHCHD5Q9BSY4 110 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
MSH5-217ENST00000494458 A0A087WZ39 114 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 EREGO14944 169 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 MPV17L2Q567V2 206 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
MSH5-217ENST00000494458 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
MSH5-217ENST00000494458 TRAV8-6A0A0B4J262 113 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 SMIM1B2RUZ4 78 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 H3BRM9 83 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 HSD52Q0P140 79 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 ESRGQ1W209 222 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 ZFAND6Q6FIF0 208 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 GEMIN7Q9H840 131 aaKnown RBP4.62□□□□□ -1.67
MSH5-217ENST00000494458 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
MSH5-217ENST00000494458 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
MSH5-217ENST00000494458 TRAV8-3A0A0A6YYJ7 113 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 TRAV13-1A0A0B4J241 112 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 HTN3P15516 51 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 PTTG1IPP53801 180 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 C10orf126Q8N4M7 172 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 LINC00469Q8N7U9 141 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 MRAPQ8TCY5 172 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
MSH5-217ENST00000494458 LITAFQ99732 161 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 PPDPFQ9H3Y8 114 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 DNAH7Q8WXX0 4024 aa4.61□□□□□ -1.67
MSH5-217ENST00000494458 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 A0A1B0GWB2 263 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 ZNF815PA8K554 130 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 NDUFA1O15239 70 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 TIMM17BO60830 172 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 HINT1P49773 126 aaPredicted RBP4.6□□□□□ -1.67
MSH5-217ENST00000494458 TCTAP57738 103 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 LINC01556Q5JQF7 62 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 COL5A1-AS1Q5SY13 56 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 KRTAP26-1Q6PEX3 210 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 ENHOQ6UWT2 76 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 UPK3BQ9BT76 320 aa4.6□□□□□ -1.67
MSH5-217ENST00000494458 TRAV8-4A0A0B4J246 113 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 A0A0J9YXY3 114 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 TMEM262E9PQX1 116 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 IGHV3-30P01768 117 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 SPINK8P0C7L1 97 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 DNAH10OSP0CZ25 163 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 IGHV3-30-5P0DP03 117 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 LGALS3P17931 250 aaKnown RBP4.59□□□□□ -1.67
MSH5-217ENST00000494458 REG3AQ06141 175 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 SS18Q15532 418 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 Q6ZVH6 145 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 CEND1Q8N111 149 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 LINC00269Q8N2A0 174 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 ORAOV1Q8WV07 137 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 NDUFA12Q9UI09 145 aa4.59□□□□□ -1.67
MSH5-217ENST00000494458 TAX1BP3O14907 124 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 FXYD2P54710 66 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 FOXI1Q12951 378 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 KIAA0087Q14695 138 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 WFDC10BQ8IUB3 73 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 SPANXDQ9BXN6 97 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 SPANXCQ9NY87 97 aa4.58□□□□□ -1.68
MSH5-217ENST00000494458 K7EP13 123 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 ANGP03950 147 aaKnown RBP4.57□□□□□ -1.68
MSH5-217ENST00000494458 HERV-K104P63124 156 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 MIAQ16674 131 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 Q8IZM0 81 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 CHCHD10Q8WYQ3 142 aaPredicted RBP4.57□□□□□ -1.68
MSH5-217ENST00000494458 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 KLK5Q9Y337 293 aaPredicted RBP4.57□□□□□ -1.68
MSH5-217ENST00000494458 LINC00588Q9Y4M8 146 aa4.57□□□□□ -1.68
MSH5-217ENST00000494458 IGHV3-64A0A075B6Q5 118 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms