RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 ZNF56Q15929 161 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 AMMECR1LQ6DCA0 310 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 PRR15Q8IV56 129 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 POM121L12Q8N7R1 296 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 OR10D4PQ8NGN7 298 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 OR10AG1Q8NH19 301 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 GTSF1LQ9H1H1 148 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
NXF3-206ENST00000494300 IGLV4-3A0A075B6K6 122 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 MUC21A0A0G2JKD1 596 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 MUC21A0A140T8X8 626 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 A8MUN3 132 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 SMIM1B2RUZ4 78 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 LST1O00453 97 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 MGPP08493 103 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 GZMBP10144 247 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 TWIST1Q15672 202 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 OSTCQ9NRP0 149 aa4.16□□□□□ -1.74
NXF3-206ENST00000494300 A0A096LPF7 62 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 MT-ND4LP03901 98 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 IGLC6P0CF74 106 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 NTF3P20783 257 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.75
NXF3-206ENST00000494300 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 LYZL1Q6UWQ5 148 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 C14orf178Q8N769 122 aaPredicted RBP4.15□□□□□ -1.75
NXF3-206ENST00000494300 SLC25A29Q8N8R3 303 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 TSKUQ8WUA8 353 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 RPL36ALQ969Q0 106 aaKnown RBP4.15□□□□□ -1.75
NXF3-206ENST00000494300 VSIG2Q96IQ7 327 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 GFRA4Q9GZZ7 299 aa4.15□□□□□ -1.75
NXF3-206ENST00000494300 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 TMEM218A2RU14 115 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 C9JQL5 133 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 DPM2O94777 84 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 COA6Q5JTJ3 125 aaKnown RBP4.14□□□□□ -1.75
NXF3-206ENST00000494300 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 YPEL4Q96NS1 127 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 DPH3P1Q9H4G8 78 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 MRPS16Q9Y3D3 137 aaKnown RBP4.14□□□□□ -1.75
NXF3-206ENST00000494300 ZNF706Q9Y5V0 76 aaPredicted RBP4.14□□□□□ -1.75
NXF3-206ENST00000494300 DNAH9Q9NYC9 4486 aa4.14□□□□□ -1.75
NXF3-206ENST00000494300 MUC4Q99102 2169 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 IGLV2-18A0A075B6J9 118 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 A0A087WWC5 75 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 HIGD1CA8MV81 97 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 SCO1O75880 301 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 NDUFA6P56556 154 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 HERVK_113P61574 105 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 ESRGQ1W209 222 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 IMUPQ9GZP8 106 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
NXF3-206ENST00000494300 TRBV7-3A0A075B6L6 115 aa4.12□□□□□ -1.75
NXF3-206ENST00000494300 LINC00862A6NCI5 91 aa4.12□□□□□ -1.75
NXF3-206ENST00000494300 M0R2N4 97 aa4.12□□□□□ -1.75
NXF3-206ENST00000494300 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
NXF3-206ENST00000494300 GTSF1Q8WW33 167 aa4.12□□□□□ -1.75
NXF3-206ENST00000494300 HUWE1Q7Z6Z7 4374 aaKnown RBP4.11□□□□□ -1.75
NXF3-206ENST00000494300 NBDYA0A0U1RRE5 68 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 COX7A2LO14548 114 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 NCR2O95944 276 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 FOXA3P55318 350 aaPredicted RBP4.11□□□□□ -1.75
NXF3-206ENST00000494300 LELP1Q5T871 98 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 C10orf126Q8N4M7 172 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 NAA38Q9BRA0 125 aaKnown RBP4.11□□□□□ -1.75
NXF3-206ENST00000494300 UPK3BQ9BT76 320 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 SEC11CQ9BY50 192 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 V9GYV3 84 aa4.11□□□□□ -1.75
NXF3-206ENST00000494300 SMIM27A0A1W2PRY6 76 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 PPP1R17O96001 155 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 HBBP68871 147 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 ORMDL2Q53FV1 153 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 C1orf134Q5TEV5 83 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 DHRS4-AS1Q9P1J3 65 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 TP73-AS1Q9UF72 201 aa4.1□□□□□ -1.75
NXF3-206ENST00000494300 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 TMEM262E9PQX1 116 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 J3QR89 54 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 M0QY20 66 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 UBE2L6O14933 153 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 TRGC2P03986 189 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 INAFM2P0DMQ5 153 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 UBE2D3P61077 147 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 UBE2D2P62837 147 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 ELOBQ15370 118 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 COL5A1-AS1Q5SY13 56 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 LYRM7Q5U5X0 104 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 MRPL54Q6P161 138 aaKnown RBP4.09□□□□□ -1.75
NXF3-206ENST00000494300 C3orf22Q8N5N4 141 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 TOMM6Q96B49 74 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 CHCHD5Q9BSY4 110 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 TMEM191AQ9H0A3 160 aa4.09□□□□□ -1.75
NXF3-206ENST00000494300 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms